Evidence map›Paper›PMID 33742080›Full record

ArticleCommunications biology2021

Lin28, a major translation reprogramming factor, gains access to YB-1-packaged mRNA through its cold-shock domain.

Anastasiia Samsonova, Krystel El Hage, Bénédicte Desforges, Vandana Joshi, Marie-Jeanne Clément, Guillaume Lambert, Hélène Henrie, Nicolas Babault, Pierrick Craveur, Rachid C Maroun and 7 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

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  12. Non-Coding RNAs Are Implicit in Chronic Myeloid Leukemia Therapy Resistance.International journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 3 countries.

Anastasiia SamsonovaSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.
Krystel El HageSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.ORCID 0000-0003-4837-3888
Bénédicte DesforgesSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.
Vandana JoshiSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.
Marie-Jeanne ClémentSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.
Guillaume LambertSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.
Hélène HenrieSYNSIGHT, 4 rue Pierre Fontaine, 91058, Evry, France.
Nicolas BabaultSYNSIGHT, 4 rue Pierre Fontaine, 91058, Evry, France.
Pierrick CraveurSYNSIGHT, 4 rue Pierre Fontaine, 91058, Evry, France.
Rachid C MarounSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.
Emilie SteinerSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.
Ahmed BouhssSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.ORCID 0000-0002-6492-1429
Alexandre MaucuerSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.ORCID 0000-0003-2947-6654
Dmitry N LyabinInstitute of Protein Research, Russian Academy of Sciences, Pushchino, 142290, Russian Federation.
Lev P OvchinnikovInstitute of Protein Research, Russian Academy of Sciences, Pushchino, 142290, Russian Federation.
Loic HamonSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France.ORCID 0000-0003-2032-7994
David PastréSABNP, Univ Evry, INSERM U1204, Université Paris-Saclay, 91025, Evry, France. david.pastre@univ-evry.fr.ORCID 0000-0002-3348-9514
Inserm · FRnLIGHT (United States) · USInstitute of Protein Research · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RNA-binding protein Lin28 (Lin28a) is an important pluripotency factor that reprograms translation and promotes cancer progression. Although Lin28 blocks let-7 microRNA maturation, Lin28 also binds to a large set of cytoplasmic mRNAs directly. However, how Lin28 regulates the processing of many mRNAs to reprogram global translation remains unknown. We show here, using a structural and cellular approach, a mixing of Lin28 with YB-1 (YBX1) in the presence of mRNA owing to their cold-shock domain, a conserved β-barrel structure that binds to ssRNA cooperatively. In contrast, the other RNA binding-proteins without cold-shock domains tested, HuR, G3BP-1, FUS and LARP-6, did not mix with YB-1. Given that YB-1 is the core component of dormant mRNPs, a model in which Lin28 gains access to mRNPs through its co-association with YB-1 to mRNA may provide a means for Lin28 to reprogram translation. We anticipate that the translational plasticity provided by mRNPs may contribute to Lin28 functions in development and adaptation of cancer cells to an adverse environment.

Indexed as

Binding SitesCell ProliferationCytoplasmic GranulesFemaleHeLa CellsHumansMagnetic Resonance SpectroscopyMolecular Dynamics SimulationProtein BindingProtein Interaction Domains and MotifsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerUterine Cervical NeoplasmsY-Box-Binding Protein 1Lin28A protein, humanmessenger ribonucleoproteinRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerY-Box-Binding Protein 1YBX1 protein, human

Identifiers

PMID33742080
PMCPMC7979924
OpenAlexW3138843327

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.