Evidence map›Paper›PMID 33740463›Full record

ArticleStem cell reports2021

Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information.

Ying Chen, Kunie Sakurai, Sumihiro Maeda, Tohru Masui, Hideyuki Okano, Johannes Dewender, Stefanie Seltmann, Andreas Kurtz, Hiroshi Masuya, Yukio Nakamura and 5 more

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 4 countries.

Ying ChenCenter for iPS Cell Research and Application (CiRA), Kyoto University, 53 Kawahara-cho, Sho-goin, Sakyo-ku, Kyoto 606-8507, Japan.
Kunie SakuraiCenter for iPS Cell Research and Application (CiRA), Kyoto University, 53 Kawahara-cho, Sho-goin, Sakyo-ku, Kyoto 606-8507, Japan.
Sumihiro MaedaDepartment of Physiology, Keio University School of Medicine, Tokyo 160-8582, Japan.
Tohru MasuiNational Center for Medical Genetics, Keio University School of Medicine, Tokyo 160-8582, Japan.
Hideyuki OkanoDepartment of Physiology, Keio University School of Medicine, Tokyo 160-8582, Japan.
Johannes DewenderFraunhofer Institute for Biomedical Engineering, Biomedical Data and Bioethics, Anna-Louisa-Karsch-Strasse 2, 10178 Berlin, Germany.
Stefanie SeltmannFraunhofer Institute for Biomedical Engineering, Biomedical Data and Bioethics, Anna-Louisa-Karsch-Strasse 2, 10178 Berlin, Germany.
Andreas KurtzFraunhofer Institute for Biomedical Engineering, Biomedical Data and Bioethics, Anna-Louisa-Karsch-Strasse 2, 10178 Berlin, Germany; BIH Center for Regenerative Therapies (BCRT), Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany.
Hiroshi MasuyaIntegrated Bioresource Information Division, RIKEN BioResource Research Center, Tsukuba, Ibaraki 305-0074, Japan.
Yukio NakamuraCell Engineering Division, RIKEN BioResource Research Center, Tsukuba, Ibaraki 305-0074, Japan.
Michael SheldonDepartment of Genetics and Human Genetics Institute of New Jersey, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA.
Juliane SchneiderHarvard Catalyst|The Harvard Clinical and Translational Science Center, Boston, MA 02215, USA.
Glyn N StaceyInternational Stem Cell Banking Initiative, 2 High Street, Barley, Hertfordshire SG88HZ, UK; National Stem Cell Resource Center, Institute of Zoology, Chinese Academy of Sciences, Beijing 100190, China; Innovation Academy for Stem Cell and Regeneration, Chinese Academy of Sciences, Beijing 100101, China.
Yulia PaninaCenter for iPS Cell Research and Application (CiRA), Kyoto University, 53 Kawahara-cho, Sho-goin, Sakyo-ku, Kyoto 606-8507, Japan.
Wataru FujibuchiCenter for iPS Cell Research and Application (CiRA), Kyoto University, 53 Kawahara-cho, Sho-goin, Sakyo-ku, Kyoto 606-8507, Japan. Electronic address: fujibuchi-g@cira.kyoto-u.ac.jp.
Kyoto University · JPKeio University · JPFraunhofer Institute for Biomedical Engineering · DERIKEN BioResource Research Center · JPBerlin-Brandenburger Centrum für Regenerative Therapien · DEChinese Academy of Sciences · CNCommunity Catalyst · USRutgers, The State University of New Jersey · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The past decade has witnessed an extremely rapid increase in the number of newly established stem cell lines. However, due to the lack of a standardized format, data exchange among stem cell line resources has been challenging, and no system can search all stem cell lines across resources worldwide. To solve this problem, we have developed the Integrated Collection of Stem Cell Bank data (ICSCB) (http://icscb.stemcellinformatics.org/), the largest database search portal for stem cell line information, based on the standardized data items and terms of the MIACARM framework. Currently, ICSCB can retrieve >16,000 cell lines from four major data resources in Europe, Japan, and the United States. ICSCB is automatically updated to provide the latest cell line information, and its integrative search helps users collect cell line information for over 1,000 diseases, including many rare diseases worldwide, which has been a formidable task, thereby distinguishing itself from other database search portals.

Indexed as

Biological Specimen BanksDatabases, FactualCell LineHumansInternetReference StandardsRegistriesStem CellsUser-Computer Interfacecell line statisticsdata integrationdata portaldisease classificationdiseased iPS cell lineICSCBinternational stem cell bank initiativeMIACARMstandardized searchstem cell line information

Identifiers

PMID33740463
PMCPMC8072026
OpenAlexW3136062596

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.