Evidence map›Paper›PMID 33740396›Full record

ArticleStructure (London, England : 1993)2021

Structure-based modeling and dynamics of MurM, a Streptococcus pneumoniae penicillin resistance determinant present at the cytoplasmic membrane.

Anna York, Adrian J Lloyd, Charo I Del Genio, Jonathan Shearer, Karen J Hinxman, Konstantin Fritz, Vilmos Fulop, Christopher G Dowson, Syma Khalid, David I Roper

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Clinical microbiology reviews · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Anna YorkSchool of Life Science, University of Warwick, Coventry, West Midlands CV4 7AL, UK.
Adrian J LloydSchool of Life Science, University of Warwick, Coventry, West Midlands CV4 7AL, UK.
Charo I Del GenioCentre for Fluid and Complex Systems, School of Computing, Electronics and Mathematics, University of Coventry, West Midlands CV1 5FB, UK.
Jonathan ShearerSchool of Chemistry, University of Southampton, Southampton, Hampshire SO17 1BJ, UK.
Karen J HinxmanSchool of Life Science, University of Warwick, Coventry, West Midlands CV4 7AL, UK.
Konstantin FritzSchool of Life Science, University of Warwick, Coventry, West Midlands CV4 7AL, UK.
Vilmos FulopSchool of Life Science, University of Warwick, Coventry, West Midlands CV4 7AL, UK.
Christopher G DowsonSchool of Life Science, University of Warwick, Coventry, West Midlands CV4 7AL, UK.
Syma KhalidSchool of Chemistry, University of Southampton, Southampton, Hampshire SO17 1BJ, UK. Electronic address: s.khalid@soton.ac.uk.
David I RoperSchool of Life Science, University of Warwick, Coventry, West Midlands CV4 7AL, UK; Department of Physiology and Cellular Biophysics, Columbia University Irving Medical Center, New York, NY, USA. Electronic address: david.roper@warwick.ac.uk.
University of Warwick · GBUniversity of Southampton · GBColumbia University Irving Medical Center · USCoventry University · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J014532/1Biotechnology and Biological Sciences Research Council BB/N003241/1Medical Research Council G0400848Medical Research Council G1100127Medical Research Council MR/N002679/1
6 · The paper itself

Abstract

Branched Lipid II, required for the formation of indirectly crosslinked peptidoglycan, is generated by MurM, a protein essential for high-level penicillin resistance in the human pathogen Streptococcus pneumoniae. We have solved the X-ray crystal structure of Staphylococcus aureus FemX, an isofunctional homolog, and have used this as a template to generate a MurM homology model. Using this model, we perform molecular docking and molecular dynamics to examine the interaction of MurM with the phospholipid bilayer and the membrane-embedded Lipid II substrate. Our model suggests that MurM is associated with the major membrane phospholipid cardiolipin, and experimental evidence confirms that the activity of MurM is enhanced by this phospholipid and inhibited by its direct precursor phosphatidylglycerol. The spatial association of pneumococcal membrane phospholipids and their impact on MurM activity may therefore be critical to the final architecture of peptidoglycan and the expression of clinically relevant penicillin resistance in this pathogen.

Indexed as

Penicillin ResistanceBacterial ProteinsBinding SitesCardiolipinsCell MembraneCrystallography, X-RayModels, MolecularMolecular Docking SimulationMolecular Dynamics SimulationPeptide SynthasesPhosphatidylglycerolsProtein ConformationSequence Homology, Amino AcidStreptococcus pneumoniaeUridine Diphosphate N-Acetylmuramic AcidBacterial ProteinsCardiolipinsmuramyl-NAc-(pentapeptide)pyrophosphoryl-undecaprenolMurM protein, Streptococcus pneumoniaePeptide SynthasesPhosphatidylglycerolsUridine Diphosphate N-Acetylmuramic Acidhomology modelingindirect crosslinkslipid bilayermolecular dockingmolecular dynamicsMurMpenicillin resistancepeptidoglycanStreptococcus pneumoniae

Identifiers

PMID33740396
PMCPMC8280954
OpenAlexW3139337351

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.