Evidence map›Paper›PMID 33739988›Full record

ArticlePLoS pathogens2021

Pathoadaptation of the passerine-associated Salmonella enterica serovar Typhimurium lineage to the avian host.

Emiliano Cohen, Shalevet Azriel, Oren Auster, Adiv Gal, Carmel Zitronblat, Svetlana Mikhlin, Felix Scharte, Michael Hensel, Galia Rahav, Ohad Gal-Mor

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Genomic Evidence of Multidrug-ResistantbioRxiv : the preprint server for biology · 2026
    Article
  3. Host adaptation inApplied and environmental microbiology · 2026
    Review
  4. A two-year study ofApplied and environmental microbiology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Animals : an open access journal from MDPI · 2024
    Review
  9. Review
  10. Review
  11. For Someone, You Are the Whole World: Host-Specificity ofInternational journal of molecular sciences · 2023
    Article
  12. Article
  13. Comparison of Phenotype and Genotype Virulence and Antimicrobial Factors ofInternational journal of molecular sciences · 2023
    Article
  14. Phytochemicals: potential alternative strategy to fightFrontiers in veterinary science · 2023
    Review
  15. Prevalence and molecular characterization ofFrontiers in microbiology · 2023
    Article
  16. Article
  17. International journal of molecular sciences · 2022
    Review
  18. Genetic characterization ofAccess microbiology · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Emiliano CohenThe Infectious Diseases Research Laboratory, Sheba Medical Center, Tel-Hashomer, Israel.
Shalevet AzrielThe Infectious Diseases Research Laboratory, Sheba Medical Center, Tel-Hashomer, Israel.
Oren AusterThe Infectious Diseases Research Laboratory, Sheba Medical Center, Tel-Hashomer, Israel.ORCID 0000-0001-8938-5805
Adiv GalFaculty of Sciences, Kibbutzim College, Tel-Aviv Israel.ORCID 0000-0001-5657-3068
Carmel ZitronblatCarmel Veterinary Clinic, Jerusalem, Israel.
Svetlana MikhlinBiovac Ltd., Or-Akiva, Israel.
Felix ScharteAbteilung Mikrobiologie, Universität Osnabrück, Osnabrück, Germany.ORCID 0000-0002-6710-9524
Michael HenselAbteilung Mikrobiologie, Universität Osnabrück, Osnabrück, Germany.ORCID 0000-0001-6604-6253
Galia RahavThe Infectious Diseases Research Laboratory, Sheba Medical Center, Tel-Hashomer, Israel.
Ohad Gal-MorThe Infectious Diseases Research Laboratory, Sheba Medical Center, Tel-Hashomer, Israel.ORCID 0000-0002-2540-6790
Tel Aviv University · ILOsnabrück University · DESheba Medical Center · ILCarmel Medical Center · ILKibbutzim College of Education, Technology and the Arts · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salmonella enterica is a diverse bacterial pathogen and a primary cause of human and animal infections. While many S. enterica serovars present a broad host-specificity, several specialized pathotypes have been adapted to colonize and cause disease in one or limited numbers of host species. The underlying mechanisms defining Salmonella host-specificity are far from understood. Here, we present genetic analysis, phenotypic characterization and virulence profiling of a monophasic S. enterica serovar Typhimurium strain that was isolated from several wild sparrows in Israel. Whole genome sequencing and complete assembly of its genome demonstrate a unique genetic signature that includes the integration of the BTP1 prophage, loss of the virulence plasmid, pSLT and pseudogene accumulation in multiple T3SS-2 effectors (sseJ, steC, gogB, sseK2, and sseK3), catalase (katE), tetrathionate respiration (ttrB) and several adhesion/ colonization factors (lpfD, fimH, bigA, ratB, siiC and siiE) encoded genes. Correspondingly, this strain demonstrates impaired biofilm formation, intolerance to oxidative stress and compromised intracellular replication within non-phagocytic host cells. Moreover, while this strain showed attenuated pathogenicity in the mouse, it was highly virulent and caused an inflammatory disease in an avian host. Overall, our findings demonstrate a unique phenotypic profile and genetic makeup of an overlooked S. Typhimurium sparrow-associated lineage and present distinct genetic signatures that are likely to contribute to its pathoadaptation to passerine birds.

Indexed as

Adaptation, PhysiologicalAnimalsBird DiseasesHost SpecificitySalmonella Infections, AnimalSalmonella typhimuriumSparrowsVirulence

Identifiers

PMID33739988
PMCPMC8011750
OpenAlexW3136641892

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.