Evidence map›Paper›PMID 33739111›Full record

ArticleNano letters2021

High-Resolution Single-Molecule FRET via DNA eXchange (FRET X).

Mike Filius, Sung Hyun Kim, Ivo Severins, Chirlmin Joo

Abstract read
In one paragraph

Article in Nano letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Nano letters · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Single-molecule fluorescence methods for protein biomarker analysis.Analytical and bioanalytical chemistry · 2023
    Review
  12. Review of FRET biosensing and its application in biomolecular detection.American journal of translational research · 2023
    Review
  13. Protein Sequencing, One Molecule at a Time.Annual review of biophysics · 2022
    Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mike FiliusDepartment of BioNanoScience, Kavli Institute of Nanoscience, Delft University of Technology, van der Maasweg 9, 2629HZ Delft, The Netherlands.
Sung Hyun KimDepartment of BioNanoScience, Kavli Institute of Nanoscience, Delft University of Technology, van der Maasweg 9, 2629HZ Delft, The Netherlands.ORCID 0000-0001-9272-7036
Ivo SeverinsDepartment of BioNanoScience, Kavli Institute of Nanoscience, Delft University of Technology, van der Maasweg 9, 2629HZ Delft, The Netherlands.
Chirlmin JooDepartment of BioNanoScience, Kavli Institute of Nanoscience, Delft University of Technology, van der Maasweg 9, 2629HZ Delft, The Netherlands.ORCID 0000-0003-2803-0335

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single-molecule FRET is a versatile tool to study nucleic acids and proteins at the nanometer scale. However, currently, only a couple of FRET pairs can be reliably measured on a single object, which makes it difficult to apply single-molecule FRET for structural analysis of biomolecules. Here, we present an approach that allows for the determination of multiple distances between FRET pairs in a single object. We use programmable, transient binding between short DNA strands to resolve the FRET efficiency of multiple fluorophore pairs. By allowing only a single FRET pair to be formed at a time, we can determine the pair distance with subnanometer precision. The distance between other pairs are determined by sequentially exchanging DNA strands. We name this multiplexing approach FRET X for FRET via DNA eXchange. Our FRET X technology will be a tool for the high-resolution analysis of biomolecules and nanostructures.

Indexed as

Fluorescence Resonance Energy TransferNucleic AcidsDNAFluorescent DyesNanotechnologyDNAFluorescent DyesNucleic AcidsDNA nanotechnologyDNA-PAINTSingle-molecule FRETsingle-molecule multiplexingstructural biology

Identifiers

PMID33739111
PMCPMC8050827

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.