Evidence map›Paper›PMID 33739025›Full record

ArticleScientific reports2021

An integrated approach for identification of a panel of candidate genes arbitrated for invasion and metastasis in oral squamous cell carcinoma.

Samapika Routray, Ravindra Kumar, Keshava K Datta, Vinuth N Puttamallesh, Aditi Chatterjee, Harsha Gowda, Neeta Mohanty, Rupesh Dash, Anshuman Dixit

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Investigating the oncogenic potential of MTHFD2 in oral squamous cell carcinoma.Journal of cancer research and clinical oncology · 2026
    Article
  3. Article
  4. Matricellular proteins: Potential biomarkers in head and neck cancer.Journal of cell communication and signaling · 2024
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 2 countries.

Samapika RoutrayDepartment of Dentistry, All India Institute of Medical Sciences, Bhubaneswar, 751019, India. drroutray.samapika@gmail.com.
Ravindra KumarSchool of Biotechnology, National Institute of Technology Calicut, Kozhikode, 673601, Kerala, India.
Keshava K DattaQIMR Berghofer Medical Research Institute, Brisbane, Australia.
Vinuth N PuttamalleshInstitute of Bioinformatics, Bangalore, India.
Aditi ChatterjeeInstitute of Bioinformatics, Bangalore, India.
Harsha GowdaInstitute of Bioinformatics, Bangalore, India.
Neeta MohantyDepartment of Oral Pathology & Microbiology, Institute of Dental Sciences, Siksha 'O' Anusandhan (Deemed to be) University, Bhubaneswar, India.
Rupesh DashInstitute of Life Sciences, Bhubaneswar, India.
Anshuman DixitInstitute of Life Sciences, Bhubaneswar, India.
Institute of Bioinformatics · INInstitute of Life Sciences · INAll India Institute of Medical Sciences Bhubaneswar · INManipal Academy of Higher Education · INNational Institute of Technology Calicut · INQIMR Berghofer Medical Research Institute · AUSiksha O Anusandhan University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oral squamous cell carcinoma (OSCC) is known for its aggressiveness associated with poor prognosis. The molecular mechanisms underlying the invasion and metastasis are still poorly understood. An improved understanding of these mechanisms shall precede the development of new diagnostic tools and targeted therapies. We report an integrated approach using bioinformatics to predict candidate genes, coupled with proteomics and immunohistochemistry for validating their presence and involvement in OSCC pathways heralding invasion and metastasis. Four genes POSTN, TNC, CAV1 and FSCN1 were identified. A protein-protein interaction network analysis teamed with pathway analysis led us to propose the role of the identified genes in invasion and metastasis in OSCC. Further analyses of archived FFPE blocks of various grades of oral cancer was carried out using TMT-based mass spectrometry and immunohistochemistry. Results of this study expressed a strong communiqué and interrelationship between these candidate genes. This study emphasizes the significance of a molecular biomarker panel as a diagnostic tool and its correlation with the invasion and metastatic pathway of OSCC. An insight into the probable association of CAF's and these biomarkers in the evolution and malignant transformation of OSCC further magnifies the molecular-biological spectrum of OSCC tumour microenvironment.

Indexed as

AgedCarcinogenesisCarcinoma, Squamous CellCarrier ProteinsCaveolin 1Cell Adhesion MoleculesComputational BiologyFemaleGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMaleMicrofilament ProteinsMiddle AgedMouth NeoplasmsNeoplasm GradingCarrier ProteinsCAV1 protein, humanCaveolin 1Cell Adhesion MoleculesFSCN1 protein, humanMicrofilament ProteinsPOSTN protein, humanTenascinTNC protein, human

Identifiers

PMID33739025
PMCPMC7973753
OpenAlexW3139338664

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.