ArticleScientific reports2021
Comparative transcriptome analysis during developmental stages of direct somatic embryogenesis in Tilia amurensis Rupr.
Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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13 citing papers in PubMed, 43 citations in OpenAlex.
- De novo transcriptome analysis of somatic embryogenesis induced by plant hormones combined with adenosine 5-monophosphate and nicotinamide adenine dinucleotide molecules in Aspilia africana (Pers.) C.D.Adams.Journal, genetic engineering & biotechnology · 2026Article
- Walnut genome editing: an optimized CRISPR/Cas9 platform with superior genotypes and endogenous promoters.Horticulture research · 2025Article
- Successful Establishment of Somatic Embryogenesis and Shoot Organogenesis Systems inPlants (Basel, Switzerland) · 2025Article
- The mechanism of PGR-free direct organogenesis in Lycium ruthenicum leaf explants revealed by RNA-Seq and phytohormone metabolome co-analysis.BMC plant biology · 2025Article
- Functional analysis of the woody oil crop Plukenetia volubilis L. LEC2 homolog PvoB3-69 in promoting regeneration.Plant cell reports · 2025Article
- Developmental phylotranscriptomics in grapevine suggests an ancestral role of somatic embryogenesis.Communications biology · 2025Article
- Transcriptome Analysis Revealed the Regulatory Mechanism of DIMBOA Affecting Early Somatic Embryogenesis inPlants (Basel, Switzerland) · 2025Article
- Assembly and analysis of the complete mitochondrial genome of endangered plantFrontiers in plant science · 2025Article
- Integrated metabolomics and transcriptomics analysis highlight key pathways involved in the somatic embryogenesis of Darjeeling tea.BMC genomics · 2024Article
- Development and characterization of novel microsatellite markers in Tilia amurensis Rupr. using next-generation sequencing.Molecular biology reports · 2022Article
- Composition and diversity of soil bacterial communities under identical vegetation along an elevational gradient in Changbai Mountains, China.Frontiers in microbiology · 2022Article
- Synthetic Strigolactone GR24 ImprovesPlants (Basel, Switzerland) · 2021Article
- Global Transcriptomic Analysis Reveals Differentially Expressed Genes Involved in Embryogenic Callus Induction in Drumstick (International journal of molecular sciences · 2021Article
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Authors and funding
6 authors at 3 institutions in 1 country.
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No grant is acknowledged in the PubMed record.
Abstract
Tilia species are valuable woody species due to their beautiful shape and role as honey trees. Somatic embryogenesis can be an alternative method for mass propagation of T. amurensis. However, the molecular mechanisms of T. amurensis somatic embryogenesis are yet to be known. Here, we conducted comparative transcriptional analysis during somatic embryogenesis of T. amurensis. RNA-Seq identified 1505 differentially expressed genes, including developmental regulatory genes. Auxin related genes such as YUC, AUX/IAA and ARF and signal transduction pathway related genes including LEA and SERK were differentially regulated during somatic embryogenesis. Also, B3 domain family (LEC2, FUS3), VAL and PKL, the regulatory transcription factors, were differentially expressed by somatic embryo developmental stages. Our results could provide plausible pathway of signaling somatic embryogenesis of T. amurensis, and serve an important resource for further studies in direct somatic embryogenesis in woody plants.
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