Evidence map›Paper›PMID 33735294›Full record

ArticlePLoS pathogens2021

Combining viral genetic and animal mobility network data to unravel peste des petits ruminants transmission dynamics in West Africa.

Arnaud Bataille, Habib Salami, Ismaila Seck, Modou Moustapha Lo, Aminata Ba, Mariame Diop, Baba Sall, Coumba Faye, Mbargou Lo, Lanceï Kaba and 20 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 4 institutions in 4 countries.

Arnaud BatailleASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France.ORCID 0000-0002-3508-2144
Habib SalamiASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France.ORCID 0000-0002-3535-2896
Ismaila SeckDirection des Services Vétérinaires, Dakar, Senegal.ORCID 0000-0003-3375-7766
Modou Moustapha LoInstitut Sénégalais de Recherches Agricoles, Laboratoire National d'Elevahge et de Recherches Vétérinaires (LNERV), Dakar-Hann, Sénégal.
Aminata BaInstitut Sénégalais de Recherches Agricoles, Laboratoire National d'Elevahge et de Recherches Vétérinaires (LNERV), Dakar-Hann, Sénégal.
Mariame DiopInstitut Sénégalais de Recherches Agricoles, Laboratoire National d'Elevahge et de Recherches Vétérinaires (LNERV), Dakar-Hann, Sénégal.ORCID 0000-0002-3713-2125
Baba SallDirection des Services Vétérinaires, Dakar, Senegal.
Coumba FayeDirection des Services Vétérinaires, Dakar, Senegal.
Mbargou LoDirection des Services Vétérinaires, Dakar, Senegal.
Lanceï KabaInstitut Supérieur des Sciences et de Médecine Vétérinaire, Dalaba, Guinea.ORCID 0000-0002-3699-783X
Youssouf SidimeInstitut Supérieur des Sciences et de Médecine Vétérinaire, Dalaba, Guinea.
Mohamed KeyraInstitut Supérieur des Sciences et de Médecine Vétérinaire, Dalaba, Guinea.ORCID 0000-0003-1013-7919
Alpha Oumar Sily DialloInstitut Supérieur des Sciences et de Médecine Vétérinaire, Dalaba, Guinea.
Mamadou NiangLaboratoire Central Vétérinaire (LCV), Bamako, Mali.
Cheick Abou Kounta SidibeLaboratoire Central Vétérinaire (LCV), Bamako, Mali.
Amadou SeryLaboratoire Central Vétérinaire (LCV), Bamako, Mali.
Martin DakouoLaboratoire Central Vétérinaire (LCV), Bamako, Mali.
Ahmed Bezeid El MamyOffice National de Recherches et de Développement de l'Elevage (ONARDEL), Nouakchott, Mauritania.ORCID 0000-0001-8503-2025
Ahmed Salem El ArbiOffice National de Recherches et de Développement de l'Elevage (ONARDEL), Nouakchott, Mauritania.
Yahya BarryOffice National de Recherches et de Développement de l'Elevage (ONARDEL), Nouakchott, Mauritania.
Ekaterina IsselmouOffice National de Recherches et de Développement de l'Elevage (ONARDEL), Nouakchott, Mauritania.
Habiboullah HabiboullahOffice National de Recherches et de Développement de l'Elevage (ONARDEL), Nouakchott, Mauritania.
Abdellahi Salem LellaOffice National de Recherches et de Développement de l'Elevage (ONARDEL), Nouakchott, Mauritania.
Baba DoumbiaOffice National de Recherches et de Développement de l'Elevage (ONARDEL), Nouakchott, Mauritania.
Mohamed Baba GueyaOffice National de Recherches et de Développement de l'Elevage (ONARDEL), Nouakchott, Mauritania.
Caroline CosteASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France.
Cécile Squarzoni DiawASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France.ORCID 0000-0001-6309-0347
Olivier KwiatekASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France.
Geneviève LibeauASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France.ORCID 0000-0003-4254-8915
Andrea ApolloniASTRE, Univ Montpellier, CIRAD, INRAE, Montpellier, France.
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRInstitut Sénégalais de Recherches Agricoles · SNInstitut Supérieur Agronomique et Vétérinaire Valéry Giscard d'Estaing · GNMali-Folkecenter · ML

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peste des petits ruminants (PPR) is a deadly viral disease that mainly affects small domestic ruminants. This disease threaten global food security and rural economy but its control is complicated notably because of extensive, poorly monitored animal movements in infected regions. Here we combined the largest PPR virus genetic and animal mobility network data ever collected in a single region to improve our understanding of PPR endemic transmission dynamics in West African countries. Phylogenetic analyses identified the presence of multiple PPRV genetic clades that may be considered as part of different transmission networks evolving in parallel in West Africa. A strong correlation was found between virus genetic distance and network-related distances. Viruses sampled within the same mobility communities are significantly more likely to belong to the same genetic clade. These results provide evidence for the importance of animal mobility in PPR transmission in the region. Some nodes of the network were associated with PPRV sequences belonging to different clades, representing potential "hotspots" for PPR circulation. Our results suggest that combining genetic and mobility network data could help identifying sites that are key for virus entrance and spread in specific areas. Such information could enhance our capacity to develop locally adapted control and surveillance strategies, using among other risk factors, information on animal mobility.

Indexed as

Animal MigrationPeste-des-petits-ruminants virusAfrica, WesternAnimalsGoatsPeste-des-Petits-RuminantsSheep

Identifiers

PMID33735294
PMCPMC8009415
OpenAlexW3137107375

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.