Evidence map›Paper›PMID 33733306›Full record

ArticleCellular and molecular life sciences : CMLS2021

RNA and DNA G-quadruplexes bind to human dicer and inhibit its activity.

Natalia Koralewska, Agnieszka Szczepanska, Kinga Ciechanowska, Marta Wojnicka, Maria Pokornowska, Marek C Milewski, Dorota Gudanis, Daniel Baranowski, Chandran Nithin, Janusz M Bujnicki and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. G-quadruplexes from non-coding RNAs.Journal of molecular medicine (Berlin, Germany) · 2023
    Review
  10. G-Quadruplexes Regulate miRNA Biogenesis in Live Zebrafish Embryos.International journal of molecular sciences · 2023
    Article
  11. 3D Modeling of Non-coding RNA Interactions.Advances in experimental medicine and biology · 2022
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Natalia Koralewska *Department of Molecular and Systems Biology, Institute of Bioorganic Chemistry Polish Academy of Sciences, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0001-7096-0128
Agnieszka Szczepanska *Department of Ribonucleoprotein Biochemistry, Institute of Bioorganic Chemistry Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0001-8548-4099
Kinga CiechanowskaDepartment of Ribonucleoprotein Biochemistry, Institute of Bioorganic Chemistry Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0003-1958-0546
Marta WojnickaDepartment of Ribonucleoprotein Biochemistry, Institute of Bioorganic Chemistry Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0002-5956-7787
Maria PokornowskaDepartment of Ribonucleoprotein Biochemistry, Institute of Bioorganic Chemistry Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0002-3233-7500
Marek C MilewskiDepartment of Molecular and Systems Biology, Institute of Bioorganic Chemistry Polish Academy of Sciences, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0003-0568-3827
Dorota GudanisDepartment of Biomolecular NMR, Institute of Bioorganic Chemistry Polish Academy of Sciences, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0001-5046-9761
Daniel BaranowskiDepartment of Biomolecular NMR, Institute of Bioorganic Chemistry Polish Academy of Sciences, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0002-4346-4804
Chandran NithinLaboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology, 02-109, Warsaw, Poland.ORCID http://orcid.org/0000-0001-8212-6093
Janusz M BujnickiLaboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology, 02-109, Warsaw, Poland.ORCID http://orcid.org/0000-0002-6633-165X
Zofia GdaniecDepartment of Biomolecular NMR, Institute of Bioorganic Chemistry Polish Academy of Sciences, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0003-2955-1829
Marek FiglerowiczDepartment of Molecular and Systems Biology, Institute of Bioorganic Chemistry Polish Academy of Sciences, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0002-6392-0192
Anna Kurzynska-KokorniakDepartment of Ribonucleoprotein Biochemistry, Institute of Bioorganic Chemistry Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland. akurzyns@man.poznan.pl.ORCID http://orcid.org/0000-0002-7034-3370
Institute of Bioorganic Chemistry, Polish Academy of Sciences · PLInternational Institute of Molecular and Cell Biology · PL

Funding

Ministry of Science and Higher Education KNOW program for years 2014-2018Narodowe Centrum Nauki 2016/22/E/NZ1/00422Narodowe Centrum Nauki 2017/26/A/NZ1/01083Narodowe Centrum Nauki (PL) 2017/01/X/ST5/00589Narodowym Centrum Nauki 2017/01/X/ST5/00577
6 · The paper itself

Abstract

Guanine (G)-rich single-stranded nucleic acids can adopt G-quadruplex structures. Accumulating evidence indicates that G-quadruplexes serve important regulatory roles in fundamental biological processes such as DNA replication, transcription, and translation, while aberrant G-quadruplex formation is linked to genome instability and cancer. Understanding the biological functions played by G-quadruplexes requires detailed knowledge of their protein interactome. Here, we report that both RNA and DNA G-quadruplexes are bound by human Dicer in vitro. Using in vitro binding assays, mutation studies, and computational modeling we demonstrate that G-quadruplexes can interact with the Platform-PAZ-Connector helix cassette of Dicer, the region responsible for anchoring microRNA precursors (pre-miRNAs). Consequently, we show that G-quadruplexes efficiently and stably inhibit the cleavage of pre-miRNA by Dicer. Our data highlight the potential of human Dicer for binding of G-quadruplexes and allow us to propose a G-quadruplex-driven sequestration mechanism of Dicer regulation.

Indexed as

G-QuadruplexesDEAD-box RNA HelicasesDNAEnzyme InhibitorsHumansMicroRNAsNucleic Acid ConformationProtein ConformationRibonuclease IIIRNADEAD-box RNA HelicasesDICER1 protein, humanDNAEnzyme InhibitorsMicroRNAsRibonuclease IIIRNADicer inhibitionDicer PPC cassetteMiRNA biogenesisPAZ domainRegulation of enzyme activityRibonucleoprotein complexes

Identifiers

PMID33733306
PMCPMC8038994
OpenAlexW3137734205

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.