Evidence map›Paper›PMID 33733305›Full record

ArticleMicrobial ecology2022

Diversity of Fungi Present in Permafrost in the South Shetland Islands, Maritime Antarctic.

Thamar Holanda da Silva, Paulo E A S Câmara, Otávio Henrique Bezerra Pinto, Micheline Carvalho-Silva, Fábio Soares Oliveira, Peter Convey, Carlos Augusto Rosa, Luiz Henrique Rosa

Abstract read
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In one paragraph

Article in Microbial ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Thamar Holanda da SilvaLaboratório de Microbiologia Polar e Conexões Tropicais, Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, P. O. Box 486, Belo Horizonte, MG, CEP 31270-901, Brazil.
Paulo E A S CâmaraDepartamento de Botânica, Universidade de Brasília, Brasília, Brazil.
Otávio Henrique Bezerra PintoDepartamento de Biologia Celular, Universidade de Brasília, Brasília, Brazil.
Micheline Carvalho-SilvaDepartamento de Botânica, Universidade de Brasília, Brasília, Brazil.
Fábio Soares OliveiraDepartamento de Geografia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Peter ConveyBritish Antarctic Survey, NERC, High Cross, Madingley Road, Cambridge, CB3 0ET, UK.
Carlos Augusto RosaLaboratório de Microbiologia Polar e Conexões Tropicais, Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, P. O. Box 486, Belo Horizonte, MG, CEP 31270-901, Brazil.
Luiz Henrique RosaLaboratório de Microbiologia Polar e Conexões Tropicais, Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, P. O. Box 486, Belo Horizonte, MG, CEP 31270-901, Brazil. lhrosa@icb.ufmg.br.ORCID http://orcid.org/0000-0001-9749-5182

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We assess the fungal diversity present in permafrost from different islands in the South Shetland Islands archipelago, maritime Antarctic, using next-generation sequencing (NGS). We detected 1,003,637 fungal DNA reads representing, in rank abundance order, the phyla Ascomycota, Mortierellomycota, Basidiomycota, Chytridiomycota, Rozellomycota, Mucoromycota, Calcarisporiellomycota and Zoopagomycota. Ten taxa were dominant these being, in order of abundance, Pseudogymnoascus appendiculatus, Penicillium sp., Pseudogymnoascus roseus, Penicillium herquei, Curvularia lunata, Leotiomycetes sp., Mortierella sp. 1, Mortierella fimbricystis, Fungal sp. 1 and Fungal sp. 2. A further 38 taxa had intermediate abundance and 345 were classified as rare. The total fungal community detected in the permafrost showed high indices of diversity, richness and dominance, although these varied between the sampling locations. The use of a metabarcoding approach revealed the presence of DNA of a complex fungal assemblage in the permafrost of the South Shetland Islands including taxa with a range of ecological functions among which were multiple animal, human and plant pathogenic fungi. Further studies are required to determine whether the taxa identified are present in the form of viable cells or propagules and which might be released from melting permafrost to other Antarctic habitats and potentially dispersed more widely.

Indexed as

PermafrostAnimalsAntarctic RegionsDNA Barcoding, TaxonomicDNA, FungalFungiHumansIslandsDNA, FungalAntarcticaClimate changeFrozen soilFungiMetabarcoding

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.