Evidence map›Paper›PMID 33732658›Full record

ArticleFrontiers in cellular and infection microbiology2021

Using scRNA-seq to Identify Transcriptional Variation in the Malaria Parasite Ookinete Stage.

Kathrin Witmer, Farah Aida Dahalan, Tom Metcalf, Arthur M Talman, Virginia M Howick, Mara K N Lawniczak

Abstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. MappingbioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Malaria: past, present, and future.Signal transduction and targeted therapy · 2025
    Review
  6. Article
  7. Article
  8. Novel systems to study vector-pathogen interactions in malaria.Frontiers in cellular and infection microbiology · 2023
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kathrin WitmerParasites and Microbes Programme, Wellcome Sanger Institute, Hinxton, United Kingdom.
Farah Aida DahalanDepartment of Life Sciences, Imperial College London, London, United Kingdom.
Tom MetcalfParasites and Microbes Programme, Wellcome Sanger Institute, Hinxton, United Kingdom.
Arthur M TalmanParasites and Microbes Programme, Wellcome Sanger Institute, Hinxton, United Kingdom.
Virginia M HowickParasites and Microbes Programme, Wellcome Sanger Institute, Hinxton, United Kingdom.
Mara K N LawniczakParasites and Microbes Programme, Wellcome Sanger Institute, Hinxton, United Kingdom.

Funding

Medical Research Council G1100339Wellcome TrustWellcome Trust 206194/Z/17/ZWellcome Trust 220185/Z/20/Z
6 · The paper itself

Abstract

The crossing of the mosquito midgut epithelium by the malaria parasite motile ookinete form represents the most extreme population bottleneck in the parasite life cycle and is a prime target for transmission blocking strategies. However, we have little understanding of the clonal variation that exists in a population of ookinetes in the vector, partially because the parasites are difficult to access and are found in low numbers. Within a vector, variation may result as a response to specific environmental cues or may exist independent of those cues as a potential bet-hedging strategy. Here we use single-cell RNA-seq to profile transcriptional variation in

Indexed as

RNA, Small CytoplasmicAnimalsMosquito VectorsPlasmodium bergheiRNA-SeqSingle-Cell AnalysisRNA, Small CytoplasmicAnophelesmalariaookinetePlasmodiumscRNA-seqtranscriptomics

Identifiers

PMID33732658
PMCPMC7958875

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.