Evidence map›Paper›PMID 33732503›Full record

ArticleVirus evolution2021

Evolution of DNA packaging in gene transfer agents.

Emma S Esterman, Yuri I Wolf, Roman Kogay, Eugene V Koonin, Olga Zhaxybayeva

Abstract read
In one paragraph

Article in Virus evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
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  14. Article
  15. Diversity, Origin and Evolution of the ESCRT Systems.bioRxiv : the preprint server for biology · 2024
    Article
  16. Article
  17. Article
  18. Marine viral particles reveal an expansive repertoire of phage-parasitizing mobile elements.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Loss of the Rhodobacter capsulatus Serine Acetyl Transferase Gene,Applied and environmental microbiology · 2022
    Article
  20. Microorganisms · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Emma S EstermanDepartment of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA.ORCID https://orcid.org/0000-0001-7365-0547
Yuri I WolfNational Center for Biotechnology Information, National Library of Medicine, Bethesda, MD 20894, USA.
Roman KogayDepartment of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA.
Eugene V KooninNational Center for Biotechnology Information, National Library of Medicine, Bethesda, MD 20894, USA.ORCID https://orcid.org/0000-0003-3943-8299
Olga ZhaxybayevaDepartment of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA.ORCID https://orcid.org/0000-0002-1809-3909

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene transfer agents (GTAs) are virus-like particles encoded and produced by many bacteria and archaea. Unlike viruses, GTAs package fragments of the host genome instead of the genes that encode the components of the GTA itself. As a result of this non-specific DNA packaging, GTAs can transfer genes within bacterial and archaeal communities. GTAs clearly evolved from viruses and are thought to have been maintained in prokaryotic genomes due to the advantages associated with their DNA transfer capacity. The most-studied GTA is produced by the alphaproteobacterium

Indexed as

alphaproteobacteriaDNA packaginglarge terminaseRcGTARhodobacter capsulatusTerL

Identifiers

PMID33732503
PMCPMC7947584

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.