Evidence map›Paper›PMID 33732278›Full record

ArticleFrontiers in plant science2021

Genes That Mediate Starch Metabolism in Developing and Germinated Barley Grain.

Helen M Collins, Natalie S Betts, Christoph Dockter, Oliver Berkowitz, Ilka Braumann, Jose A Cuesta-Seijo, Birgitte Skadhauge, James Whelan, Vincent Bulone, Geoffrey B Fincher

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

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  10. HarnessingFrontiers in plant science · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Helen M CollinsAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia.
Natalie S BettsAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia.
Christoph DockterCarlsberg Research Laboratory, Copenhagen, Denmark.
Oliver BerkowitzSchool of Life Sciences and ARC Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, VIC, Australia.
Ilka BraumannCarlsberg Research Laboratory, Copenhagen, Denmark.
Jose A Cuesta-SeijoCarlsberg Research Laboratory, Copenhagen, Denmark.
Birgitte SkadhaugeCarlsberg Research Laboratory, Copenhagen, Denmark.
James WhelanSchool of Life Sciences and ARC Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, VIC, Australia.
Vincent BuloneAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia.
Geoffrey B FincherAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia.
Carlsberg Laboratory · DKAustralian Research Council · AUARC Centre of Excellence in Plant Energy Biology · AULa Trobe University · AUUniversity of Adelaide · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Starch is synthesized in the endosperm of developing barley grain, where it functions as the primary source of stored carbohydrate. In germinated grain these starch reserves are hydrolyzed to small oligosaccharides and glucose, which are transported to the embryo to support the growth of the developing seedling. Some of the mobilized glucose is transiently stored as starch in the scutellum of germinated grain. These processes are crucial for early seedling vigor, which is a key determinant of crop productivity and global food security. Several starch synthases (SS), starch-branching enzymes (SBEs), and starch debranching enzymes (isoamylases, ISA), together with a limit dextrinase (LD), have been implicated in starch synthesis from nucleotide-sugar precursors. Starch synthesis occurs both in the developing endosperm and in the scutellum of germinated grain. For the complete depolymerization of starch to glucose, α-amylase (Amy), β-amylase (Bmy), isoamylase (ISA), limit dextrinase (LD), and α-glucosidase (AGL) are required. Most of these enzymes are encoded by gene families of up to 10 or more members. Here RNA-seq transcription data from isolated tissues of intact developing and germinated barley grain have allowed us to identify the most important, specific gene family members for each of these processes

Indexed as

aleuroneendospermgene familiesHordeum vulgareRNA-seqscutellumstarch degradationstarch synthesis

Identifiers

PMID33732278
PMCPMC7959180
OpenAlexW3135375686

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.