Evidence map›Paper›PMID 33731850›Full record

ArticleLeukemia2021

Pediatric MDS and bone marrow failure-associated germline mutations in SAMD9 and SAMD9L impair multiple pathways in primary hematopoietic cells.

Melvin E Thomas, Sherif Abdelhamed, Ryan Hiltenbrand, Jason R Schwartz, Sadie Miki Sakurada, Michael Walsh, Guangchun Song, Jing Ma, Shondra M Pruett-Miller, Jeffery M Klco

Open access · hybridAbstract read
In one paragraph

Article in Leukemia, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 58 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Melvin E Thomas *Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Sherif Abdelhamed *Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-3319-2403
Ryan HiltenbrandDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Jason R SchwartzDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN, USA.
Sadie Miki SakuradaCenter for Advanced Genome Engineering, St. Jude Children's Research Hospital, Memphis, TN, USA.
Michael WalshDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Guangchun SongDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Jing MaDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Shondra M Pruett-MillerCenter for Advanced Genome Engineering, St. Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-3793-585X
Jeffery M KlcoDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA. Jeffery.klco@stjude.org.ORCID http://orcid.org/0000-0003-2961-6960
St. Jude Children's Research Hospital · USVanderbilt University Medical Center · US

Funding

Cellular and functional impact of SAMD9L mutations on hematopoiesis and myelodysplasiaR01HL144653 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI KLCO, JEFFERY M · 2019 to 2023
$2.2M
Childhood Hematological Malignancies Training ProgramT32CA236748 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Charles G Mullighan · 2019 to 2026
$2.0M
Hematopoietic consequences of gain-of-function SAMD9 and SAMD9L mutationsK08HL150282 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SCHWARTZ, JASON ROSS · 2020 to 2024
$760k
The Molecular and Biochemical Function of SAMD9 and SAMD9L in Pediatric MDSF32HL152484 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI THOMAS, MELVIN EDWARD · 2020 to 2022
$155k
NCI NIH HHS T32 CA236748NHLBI NIH HHS F32 HL152484NHLBI NIH HHS K08 HL150282NHLBI NIH HHS R01 HL144653
6 · The paper itself

Abstract

Pediatric myelodysplastic syndromes (MDS) are a heterogeneous disease group associated with impaired hematopoiesis, bone marrow hypocellularity, and frequently have deletions involving chromosome 7 (monosomy 7). We and others recently identified heterozygous germline mutations in SAMD9 and SAMD9L in children with monosomy 7 and MDS. We previously demonstrated an antiproliferative effect of these gene products in non-hematopoietic cells, which was exacerbated by their patient-associated mutations. Here, we used a lentiviral overexpression approach to assess the functional impact and underlying cellular processes of wild-type and mutant SAMD9 or SAMD9L in primary mouse or human hematopoietic stem and progenitor cells (HSPC). Using a combination of protein interactome analyses, transcriptional profiling, and functional validation, we show that SAMD9 and SAMD9L are multifunctional proteins that cause profound alterations in cell cycle, cell proliferation, and protein translation in HSPCs. Importantly, our molecular and functional studies also demonstrated that expression of these genes and their mutations leads to a cellular environment that promotes DNA damage repair defects and ultimately apoptosis in hematopoietic cells. This study provides novel functional insights into SAMD9 and SAMD9L and how their mutations can potentially alter hematopoietic function and lead to bone marrow hypocellularity, a hallmark of pediatric MDS.

Indexed as

Germ-Line MutationAnimalsApoptosisBone Marrow Failure DisordersChildDNA DamageDNA RepairGenetic Predisposition to DiseaseHematopoiesisHematopoietic Stem CellsHumansIntracellular Signaling Peptides and ProteinsMiceMice, KnockoutMyelodysplastic SyndromesProtein BiosynthesisIntracellular Signaling Peptides and ProteinsSAMD9L protein, humanSamd9L protein, mouseSAMD9 protein, humanTumor Suppressor Proteins

Identifiers

PMID33731850
PMCPMC8446103
OpenAlexW3136210238

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.