Evidence map›Paper›PMID 33731735›Full record

ArticleScientific reports2021

Elucidation of the core betalain biosynthesis pathway in Amaranthus tricolor.

Yu-Cheng Chang, Yi-Ching Chiu, Nai-Wen Tsao, Yuan-Lin Chou, Choon-Meng Tan, Yi-Hsuan Chiang, Pei-Chi Liao, Ya-Chien Lee, Li-Ching Hsieh, Sheng-Yang Wang and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
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  5. Microorganisms · 2025
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  9. Plants (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Yu-Cheng ChangInstitute of Biochemistry, National Chung Hsing University, 145 Xingda Road, Taichung, 40227, Taiwan.
Yi-Ching ChiuInstitute of Biochemistry, National Chung Hsing University, 145 Xingda Road, Taichung, 40227, Taiwan.
Nai-Wen TsaoDepartment of Forestry, National Chung Hsing University, Taichung, 402, Taiwan.
Yuan-Lin ChouInstitute of Biochemistry, National Chung Hsing University, 145 Xingda Road, Taichung, 40227, Taiwan.
Choon-Meng TanInstitute of Biochemistry, National Chung Hsing University, 145 Xingda Road, Taichung, 40227, Taiwan.
Yi-Hsuan ChiangInstitute of Biochemistry, National Chung Hsing University, 145 Xingda Road, Taichung, 40227, Taiwan.
Pei-Chi LiaoInstitute of Biochemistry, National Chung Hsing University, 145 Xingda Road, Taichung, 40227, Taiwan.
Ya-Chien LeeInstitute of Biochemistry, National Chung Hsing University, 145 Xingda Road, Taichung, 40227, Taiwan.
Li-Ching HsiehInstitute of Genomics and Bioinformatics, National Chung Hsing University, Taichung, 402, Taiwan.
Sheng-Yang WangDepartment of Forestry, National Chung Hsing University, Taichung, 402, Taiwan.
Jun-Yi YangInstitute of Biochemistry, National Chung Hsing University, 145 Xingda Road, Taichung, 40227, Taiwan. jyang@nchu.edu.tw.
National Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amaranthus tricolor L., a vegetable Amaranthus species, is an economically important crop containing large amounts of betalains. Betalains are natural antioxidants and can be classified into betacyanins and betaxanthins, with red and yellow colors, respectively. A. tricolor cultivars with varying betalain contents, leading to striking red to green coloration, have been commercially produced. However, the molecular differences underlying betalain biosynthesis in various cultivars of A. tricolor remain largely unknown. In this study, A. tricolor cultivars with different colors were chosen for comparative transcriptome analysis. The elevated expression of AmCYP76AD1 in a red-leaf cultivar of A. tricolor was proposed to play a key role in producing red betalain pigments. The functions of AmCYP76AD1, AmDODAα1, AmDODAα2, and AmcDOPA5GT were also characterized through the heterologous engineering of betalain pigments in Nicotiana benthamiana. Moreover, high and low L-DOPA 4,5-dioxygenase activities of AmDODAα1 and AmDODAα2, respectively, were confirmed through in vitro enzymatic assays. Thus, comparative transcriptome analysis combined with functional and enzymatic studies allowed the construction of a core betalain biosynthesis pathway of A. tricolor. These results not only provide novel insights into betalain biosynthesis and evolution in A. tricolor but also provide a basal framework for examining genes related to betalain biosynthesis among different species of Amaranthaceae.

Indexed as

AmaranthusPlant LeavesBetalainsGene Expression Regulation, EnzymologicGene Expression Regulation, PlantBetalains

Identifiers

PMID33731735
PMCPMC7969944
OpenAlexW3138529394

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.