Evidence map›Paper›PMID 33731358›Full record

ArticleScience advances2021

Temporal mechanisms of myogenic specification in human induced pluripotent stem cells.

P Nayak, A Colas, M Mercola, S Varghese, S Subramaniam

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Neuromuscular Development and Disease: Learning FromFrontiers in cell and developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

P NayakDepartment of Bioengineering, University of California San Diego, San Diego, CA, USA.ORCID 0000-0001-6919-4286
A ColasSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
M MercolaStanford Cardiovascular Institute and Department of Medicine, Stanford University, Stanford, CA, USA.ORCID 0000-0002-1430-2013
S VargheseDepartment of Biomedical Engineering, Duke University, Durham, NC, USA. shankar@ucsd.edu shyni.varghese@duke.edu.ORCID 0000-0002-0004-7947
S SubramaniamDepartment of Bioengineering, University of California San Diego, San Diego, CA, USA. shankar@ucsd.edu shyni.varghese@duke.edu.ORCID 0000-0002-8059-4659
University of California San Diego · USCardiovascular Institute of the South · USDuke University · USSanford Burnham Prebys Medical Discovery Institute · US

Funding

Project 3 (Mercola)P01HL141084 · NHLBI · STANFORD UNIVERSITY · PI Joseph C. Wu · 2019 to 2026
$21.1M
Systems Biology Analyses for Hemodynamic Regulation of Vascular HomeostasisR01HL108735 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHIEN, SHU, SHYY, JOHN YJ · 2012 to 2024
$13.4M
The Metabolomics Data Center and Workbench (MDCW)U01DK097430 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SUBRAMANIAM, SHANKAR · 2012 to 2017
$7.4M
An Integrative Omics Approach to Identify Biomarkers Related to Preeclampsia and Breast Cancer RisksR01HD084633 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GARMIRE, LANA X · 2016 to 2020
$3.0M
Mapping Disease Pathways for Biliary AtresiaR01DK109365 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SHIN, DONGHUN, SINDHI, RAKESH K. · 2017 to 2020
$2.4M
Discovery of Small Molecule Promoters of Cardiomyocyte Proliferation to Restore Cardiac Performance in DiseaseR01HL148827 · NHLBI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI COLAS, ALEXANDRE ROMAIN · 2019 to 2022
$2.0M
Discovery of small molecule regulators of atrial cardiomyocyte action potential duration to restore normal cardiac rhythm in atrial fibrillationR01HL153645 · NHLBI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI COLAS, ALEXANDRE ROMAIN · 2021 to 2024
$1.9M
Theoretical Foundations and Software Infrastructure for Biological Network DatabasesU01CA198941 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI KOYUTURK, MEHMET · 2015 to 2017
$1.4M
Reconstruction and Modeling of Dynamical Molecular NetworksR01LM012595 · NLM · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SUBRAMANIAM, SHANKAR · 2018 to 2021
$1.3M
NCI NIH HHS U01 CA198941NHLBI NIH HHS P01 HL141084NHLBI NIH HHS R01 HL108735NHLBI NIH HHS R01 HL148827NHLBI NIH HHS R01 HL153645NICHD NIH HHS R01 HD084633NIDDK NIH HHS R01 DK109365NIDDK NIH HHS U01 DK097430NLM NIH HHS R01 LM012595
6 · The paper itself

Abstract

Understanding the mechanisms of myogenesis in human induced pluripotent stem cells (hiPSCs) is a prerequisite to achieving patient-specific therapy for diseases of skeletal muscle. hiPSCs of different origin show distinctive kinetics and ability to differentiate into myocytes. To address the unique cellular and temporal context of hiPSC differentiation, we perform a longitudinal comparison of the transcriptomic profiles of three hiPSC lines that display differential myogenic specification, one robust and two blunted. We detail temporal differences in mechanisms that lead to robust myogenic specification. We show gene expression signatures of putative cell subpopulations and extracellular matrix components that may support myogenesis. Furthermore, we show that targeted knockdown of

Indexed as

Induced Pluripotent Stem CellsCell DifferentiationHumansMesodermMuscle DevelopmentMuscle, Skeletal

Identifiers

PMID33731358
PMCPMC7968833
OpenAlexW3137366492

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.