Evidence map›Paper›PMID 33731002›Full record

ArticleBMC plant biology2021

Genome-wide identification, expression, and sequence analysis of CONSTANS-like gene family in cannabis reveals a potential role in plant flowering time regulation.

Gen Pan, Zheng Li, Ming Yin, Siqi Huang, Jie Tao, Anguo Chen, Jianjun Li, Huijuan Tang, Li Chang, Yong Deng and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Research Progress on Flowering Period of Hemp.Plants (Basel, Switzerland) · 2026
    Review
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  6. Genome-Wide Identification ofInternational journal of molecular sciences · 2025
    Article
  7. Article
  8. Horticulture research · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. Comparative genomics of flowering behavior inFrontiers in plant science · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Gen Pan *Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Zheng Li *Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Ming YinInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Siqi HuangInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Jie TaoInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Anguo ChenInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Jianjun LiInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Huijuan TangInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Li ChangInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Yong DengInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China.
Defang LiInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China. chinakenaf@126.com.
Lining ZhaoInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, China. csbtzln@163.com.
Institute of Bast Fiber Crops · CNChinese Academy of Agricultural Sciences · CN

Funding

Central Public-interest Scientific Institution Basal Research Fund 610242020003; 1610242019001China Agriculture Technology Research System CARS-16-E-02
6 · The paper itself

Abstract

backgroundCannabis, an important industrial crop, has a high sensitivity to photoperiods. The flowering time of cannabis is one of its important agronomic traits, and has a significant effect on its yield and quality. The CONSTANS-like (COL) gene plays a key role in the regulation of flowering in this plant. However, the specific roles of the COL gene family in cannabis are still unknown.

resultsIn this study, 13 CsCOL genes were identified in the cannabis genome. Phylogenetic analysis implied that the CsCOL proteins were divided into three subgroups, and each subgroup included conserved intron/exon structures and motifs. Chromosome distribution analysis showed that 13 CsCOL genes were unevenly distributed on 7 chromosomes, with chromosome 10 having the most CsCOL members. Collinearity analysis showed that two syntenic gene pairs of CsCOL4 and CsCOL11 were found in both rice and Gossypium raimondii. Of the 13 CsCOL genes, CsCOL6 and CsCOL12 were a pair of tandem duplicated genes, whereas CsCOL8 and CsCOL11 may have resulted from segmental duplication. Furthermore, tissue-specific expression showed that 10 CsCOL genes were preferentially expressed in the leaves, 1 CsCOL in the stem, and 2 CsCOL in the female flower. Most CsCOL exhibited a diurnal oscillation pattern under different light treatment. Additionally, sequence analysis showed that CsCOL3 and CsCOL7 exhibited amino acid differences among the early-flowering and late flowering cultivars.

conclusionThis study provided insight into the potential functions of CsCOL genes, and highlighted their roles in the regulation of flowering time in cannabis. Our results laid a foundation for the further elucidation of the functions of COL genes in cannabis.

Indexed as

Genes, PlantCannabisChromosome MappingChromosomes, PlantFlowersGene Expression ProfilingGenome, PlantMultigene FamilyPhylogenyCannabisCONSTANS-like gene (COL)Expression patternFlowering timeGenome-wide

Identifiers

PMID33731002
PMCPMC7972231
OpenAlexW3119357854

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.