Evidence map›Paper›PMID 33730585›Full record

ArticleCell reports2021

Transcriptional programming drives Ibrutinib-resistance evolution in mantle cell lymphoma.

Xiaohong Zhao, Michelle Y Wang, Huijuan Jiang, Tint Lwin, Paul M Park, Jing Gao, Mark B Meads, Yuan Ren, Tao Li, Jiao Sun and 13 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Advances in targeted and cellular therapies for relapsed/refractory mantle cell lymphoma: immunotherapeutic strategies and challenges.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Kinome-Wide Virtual Screening by Multi-Task Deep Learning.International journal of molecular sciences · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 5 institutions in 1 country.

Xiaohong ZhaoChemical Biology and Molecular Medicine Program, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Michelle Y WangChemical Biology and Molecular Medicine Program, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Huijuan JiangChemical Biology and Molecular Medicine Program, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Tint LwinChemical Biology and Molecular Medicine Program, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Paul M ParkDepartment of Cancer Biology, Dana Farber Cancer Institute, Boston, MA 02215, USA.
Jing GaoChemical Biology and Molecular Medicine Program, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Mark B MeadsDepartment of Malignant Hematology, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Yuan RenChemical Biology and Molecular Medicine Program, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Tao LiChemical Biology and Molecular Medicine Program, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Jiao SunDepartment of Computer Science, University of Central Florida, Orlando, FL 32816, USA.
Naima Ahmed FahmiDepartment of Computer Science, University of Central Florida, Orlando, FL 32816, USA.
Satishkumar SinghDepartment of Internal Medicine, The Ohio State University, Columbus, OH 32816, USA.
Lalit SehgalDepartment of Internal Medicine, The Ohio State University, Columbus, OH 32816, USA.
Xuefeng WangDepartment of Biostatistics and Bioinformatics, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Ariosto S SilvaDepartment of Cancer Physiology, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
Eduardo M SotomayorDepartment of Hematology and Oncology, George Washington University, Washington, D.C. 20052, USA.
Kenneth H ShainDepartment of Malignant Hematology, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA.
John L ClevelandDepartment of Tumor Biology, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL, 33612, USA.
Michael WangDepartment of Lymphoma/Myeloma, Division of Cancer Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Wei ZhangDepartment of Computer Science, University of Central Florida, Orlando, FL 32816, USA.
Jun QiDepartment of Cancer Biology, Dana Farber Cancer Institute, Boston, MA 02215, USA.
Bijal D ShahDepartment of Malignant Hematology, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA. Electronic address: bijal.shah@moffitt.org.
Jianguo TaoChemical Biology and Molecular Medicine Program, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA. Electronic address: jianguo.tao@moffitt.org.
Moffitt Cancer Center · USUniversity of Central Florida · USDana-Farber Cancer Institute · USThe Ohio State University · USGeorge Washington University · US

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI KENNETH Lynn WRIGHT · 1998 to 2026
$93.5M
TYROSINE KINASE ONCOGENESIS IN MYELOID LEUKEMIAP01CA066996 · NCI · DANA-FARBER CANCER INSTITUTE · PI SCOTT A ARMSTRONG · 1996 to 2026
$52.5M
Trageting the Multiple Myeloma EpigenomeP50CA100707 · NCI · DANA-FARBER CANCER INSTITUTE · PI ANDERSON, KENNETH C., MUNSHI, NIKHIL C. · 2003 to 2023
$45.0M
Targeting SYK Kinase in AMLP50CA206963 · NCI · DANA-FARBER CANCER INST · PI ASTER, JON C. · 2017 to 2021
$10.6M
New Therapeutic Vulnerabilities for Aggressive B-Cell LymphomaR01CA241713 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI CLEVELAND, JOHN L. · 2020 to 2024
$2.7M
Targeting Negative Regulatory Pathways for Immunotherapy of B-Cell LymphomasR01CA134807 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI TAO, JIANGUO · 2010 to 2014
$2.3M
Role of Specific Histone Deacetylases in Lymphoma Immunobiology and TherapyR01CA179062 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI SOTOMAYOR, EDUARDO M., TAO, JIANGUO · 2015 to 2019
$1.8M
Tageting BAFF and BAFF-Induced Non-Canonical NF-kB Pathways for Enhancing Mantle R01CA137123 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI TAO, JIANGUO · 2009 to 2013
$1.3M
Epigenetic Regulation of Drug Resistance to ABT-199 in B-cell MalignanciesR21CA234519 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI CLEVELAND, JOHN L. · 2019 to 2020
$412k
NCI NIH HHS P01 CA066996NCI NIH HHS P30 CA076292NCI NIH HHS P50 CA100707NCI NIH HHS P50 CA206963NCI NIH HHS R01 CA134807NCI NIH HHS R01 CA137123NCI NIH HHS R01 CA179062NCI NIH HHS R01 CA241713NCI NIH HHS R21 CA234519
6 · The paper itself

Abstract

Ibrutinib, a bruton's tyrosine kinase (BTK) inhibitor, provokes robust clinical responses in aggressive mantle cell lymphoma (MCL), yet many patients relapse with lethal Ibrutinib-resistant (IR) disease. Here, using genomic, chemical proteomic, and drug screen profiling, we report that enhancer remodeling-mediated transcriptional activation and adaptive signaling changes drive the aggressive phenotypes of IR. Accordingly, IR MCL cells are vulnerable to inhibitors of the transcriptional machinery and especially so to inhibitors of cyclin-dependent kinase 9 (CDK9), the catalytic subunit of the positive transcription elongation factor b (P-TEFb) of RNA polymerase II (RNAPII). Further, CDK9 inhibition disables reprogrammed signaling circuits and prevents the emergence of IR in MCL. Finally, and importantly, we find that a robust and facile ex vivo image-based functional drug screening platform can predict clinical therapeutic responses of IR MCL and identify vulnerabilities that can be targeted to disable the evolution of IR.

Indexed as

Transcription, GeneticAdenineAnimalsBromodomain Containing ProteinsCell Cycle ProteinsCell Line, TumorCyclin-Dependent Kinase 9Drug Resistance, NeoplasmEnhancer Elements, GeneticHumansLymphoma, Mantle-CellMaleMiceMice, Inbred NODMice, SCIDPiperidinesAdenineBRD4 protein, humanBromodomain Containing ProteinsCDK9 protein, humanCell Cycle ProteinsCyclin-Dependent Kinase 9ibrutinibPiperidinesProtein KinasesRNA Polymerase IITranscription FactorsBRD4CDK9combination therapyenhancerIbrutinibkinomemantle cell lymphomaresistancetranscriptome

Identifiers

PMID33730585
PMCPMC8057695
OpenAlexW3139356614

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.