Evidence map›Paper›PMID 33728807›Full record

ArticleTransboundary and emerging diseases2022

Molecular epidemiology of peste des petits ruminants virus in Nigeria: An update.

Samuel Mantip, Anthony Sigismeau, David Shamaki, Timothy Yusuf Woma, Olivier Kwiatek, Genevieve Libeau, Souabou Farougou, Arnaud Bataille

Open access · hybridAbstract read
In one paragraph

Article in Transboundary and emerging diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

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  16. The Spread of Peste Des Petits Ruminants Virus Lineage IV in West Africa.Animals : an open access journal from MDPI · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Samuel MantipDepartment of Animal Health and Production, University of Abomey-Calavi, Cotonou, Benin.ORCID https://orcid.org/0000-0002-8016-0770
Anthony SigismeauCIRAD, UMR ASTRE, Montpellier, France.
David ShamakiVirology Division, National Veterinary Research Institute, Vom, Nigeria.
Timothy Yusuf WomaVirology Division, National Veterinary Research Institute, Vom, Nigeria.
Olivier KwiatekCIRAD, UMR ASTRE, Montpellier, France.
Genevieve LibeauCIRAD, UMR ASTRE, Montpellier, France.
Souabou FarougouDepartment of Animal Health and Production, University of Abomey-Calavi, Cotonou, Benin.
Arnaud BatailleCIRAD, UMR ASTRE, Montpellier, France.
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRNational Veterinary Research Institute · NGUniversité d'Abomey-Calavi · BJ

Funding

Centre de Coopération Internationale en Recherche Agronomique pour le Développement. France Grant (SI2.756606)(FOOD/2019/410-957) from the European Union.National Veterinary Research Institute, Vom. Nigeria.
6 · The paper itself

Abstract

Peste des petits ruminants (PPR) is a highly contagious viral disease that mainly affects goats and sheep in Asia, Africa and the Middle East. The PPR virus (PPRV) can be classified into four genetically distinct lineages (I, II, III and IV). All have been historically present in Africa, except the Asian lineage IV that has been spreading across the globe and across Africa in recent decades. Previous studies have identified the presence of lineage IV in Nigeria since 2010. In the present study, samples were taken from 429 small ruminants with PPR symptoms across Nigeria in 2017-2020 to provide an update on the distribution and genetic diversity of PPRV in the country. Sequences from a portion of the PPRV nucleoprotein (N) gene were obtained from 91 samples, 90 belonging to lineage IV and one to lineage II. Phylogenetic analysis identified at least four lineage IV sub-clusters in Nigeria, grouping samples across multiple regions. Our results suggest extensive endemic circulation of a wide range of PPRV strains across Nigeria and across borders with neighbouring countries, underlining the difficulty involved in controlling the disease in the region.

Indexed as

Goat DiseasesPeste-des-Petits-RuminantsPeste-des-petits-ruminants virusSheep DiseasesAnimalsGoatsMolecular EpidemiologyNigeriaPhylogenySheepdistributiongenetic diversityMorbillivirusNigeriaPhylogenytransboundary disease

Identifiers

PMID33728807
PMCPMC9290802
OpenAlexW3136595702

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.