Evidence map›Paper›PMID 33727228›Full record

ArticleCancer research2021

Alterations in the Global Proteome and Phosphoproteome in Third Generation EGFR TKI Resistance Reveal Drug Targets to Circumvent Resistance.

Xu Zhang, Tapan K Maity, Karen E Ross, Yue Qi, Constance M Cultraro, Meriam Bahta, Stephanie Pitts, Meghana Keswani, Shaojian Gao, Khoa Dang P Nguyen and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. A CMTM6 Nanobody Overcomes EGFR-TKI Resistance in Non-Small Cell Lung Cancer.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  9. Review
  10. Article
  11. Article
  12. PrPOncogene · 2024
    Article
  13. MUC1-C Is a Common Driver of Acquired Osimertinib Resistance in NSCLC.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2024
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Targeting epigenetic regulators to overcome drug resistance in cancers.Signal transduction and targeted therapy · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Xu Zhang *Thoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland. xu.zhang@nih.gov udayan.guha@nih.gov.
Tapan K Maity *Thoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.
Karen E RossDept. of Biochemistry and Molecular & Cellular Biology, Georgetown University Medical Center, Washington, D.C.ORCID 0000-0003-4633-6055
Yue QiThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.
Constance M CultraroThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.
Meriam BahtaThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.
Stephanie PittsThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.
Meghana KeswaniThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.ORCID 0000-0003-4664-9553
Shaojian GaoThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.
Khoa Dang P NguyenThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.ORCID 0000-0003-0888-304X
Julie CowartCenter for Bioinformatics and Computational Biology, University of Delaware, Newark, Delaware.
Fatos KirkaliThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland.
Cathy WuCenter for Bioinformatics and Computational Biology, University of Delaware, Newark, Delaware.
Udayan GuhaThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland. xu.zhang@nih.gov udayan.guha@nih.gov.
Center for Cancer Research · USUniversity of Delaware · USGeorgetown University · US

Funding

Data Coordination and Integration Center for LINCS-BD2KU54HL127624 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MA'AYAN, AVI, SCHURER, STEPHAN C · 2014 to 2019
$23.5M
Protein phosphorylation downstream of mutant EGFR kinasesZIABC011410 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GUHA, UDAYAN · 2011 to 2020
$6.1M
Semantic Literature Annotation and Integrative Panomics Analysis for PTM-Disease Knowledge Network DiscoveryU01GM120953 · NIGMS · UNIVERSITY OF DELAWARE · PI SHANKER, VIJAY K, WU, CATHY H. · 2016 to 2018
$1.1M
Comparison of substrate specificities of wild type and mutant EGFR kinasesZIABC011408 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GUHA, UDAYAN · 2011 to 2018
$601k
Intramural NIH HHS ZIA BC011408Intramural NIH HHS ZIA BC011410NHLBI NIH HHS U54 HL127624NIGMS NIH HHS U01 GM120953
6 · The paper itself

Abstract

Lung cancer is the leading cause of cancer mortality worldwide. The treatment of patients with lung cancer harboring mutant EGFR with orally administered EGFR tyrosine kinase inhibitors (TKI) has been a paradigm shift. Osimertinib and rociletinib are third-generation irreversible EGFR TKIs targeting the EGFR T790M mutation. Osimertinib is the current standard of care for patients with EGFR mutations due to increased efficacy, lower side effects, and enhanced brain penetrance. Unfortunately, all patients develop resistance. Genomic approaches have primarily been used to interrogate resistance mechanisms. Here we characterized the proteome and phosphoproteome of a series of isogenic EGFR-mutant lung adenocarcinoma cell lines that are either sensitive or resistant to these drugs, comprising the most comprehensive proteomic dataset resource to date to investigate third generation EGFR TKI resistance in lung adenocarcinoma. Unbiased global quantitative mass spectrometry uncovered alterations in signaling pathways, revealed a proteomic signature of epithelial-mesenchymal transition, and identified kinases and phosphatases with altered expression and phosphorylation in TKI-resistant cells. Decreased tyrosine phosphorylation of key sites in the phosphatase SHP2 suggests its inhibition, resulting in subsequent inhibition of RAS/MAPK and activation of PI3K/AKT pathways. Anticorrelation analyses of this phosphoproteomic dataset with published drug-induced P100 phosphoproteomic datasets from the Library of Integrated Network-Based Cellular Signatures program predicted drugs with the potential to overcome EGFR TKI resistance. The PI3K/MTOR inhibitor dactolisib in combination with osimertinib overcame resistance both

Indexed as

Drug Resistance, NeoplasmAdenocarcinoma of LungAntineoplastic AgentsApoptosisCell ProliferationErbB ReceptorsHumansImidazolesLung NeoplasmsPhosphatidylinositol 3-KinasesPhosphoproteinsProtein Kinase InhibitorsProteomeQuinolinesTOR Serine-Threonine KinasesTumor Cells, CulturedAntineoplastic AgentsdactolisibEGFR protein, humanErbB ReceptorsImidazolesMTOR protein, humanPhosphatidylinositol 3-KinasesPhosphoproteinsProtein Kinase InhibitorsProteomeQuinolinesTOR Serine-Threonine Kinases

Identifiers

PMID33727228
PMCPMC8182571
OpenAlexW3137795435

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.