Evidence map›Paper›PMID 33723294›Full record

ArticleScientific reports2021

SARS-CoV-2-induced humoral immunity through B cell epitope analysis in COVID-19 infected individuals.

Shota Yoshida, Chikako Ono, Hiroki Hayashi, Shinya Fukumoto, Satoshi Shiraishi, Kazunori Tomono, Hisashi Arase, Yoshiharu Matsuura, Hironori Nakagami

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 39 citations in OpenAlex.

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  5. Establishment and clinical application of SARS-CoV-2 catch column.Clinical and experimental nephrology · 2023
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  8. Preclinical study of a DNA vaccine targeting SARS-CoV-2.Current research in translational medicine · 2022
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  10. An Imported Case of AfebrileTropical medicine and infectious disease · 2022
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  17. Seroprevalence of SARS-CoV-2 immunoglobulin antibodies in Wuhan, China: part of the city-wide massive testing campaign.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2021
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Shota YoshidaDepartment of Health Development and Medicine, Osaka University Graduate School of Medicine, Suita, Japan.
Chikako OnoDepartment of Molecular Virology, Research Institute for Microbial Diseases, Osaka University, Suita, Japan.
Hiroki HayashiDepartment of Health Development and Medicine, Osaka University Graduate School of Medicine, Suita, Japan.
Shinya FukumotoDepartment of Premier Preventive Medicine, Osaka City University Graduate School of Medicine, Osaka, Japan.
Satoshi ShiraishiJuso Osaka City Hospital, Osaka, Japan.
Kazunori TomonoDivision of Infection Control and Prevention, Osaka University Hospital, Suita, Japan.
Hisashi AraseDepartment of Immunochemistry, Research Institute for Microbial Diseases, Osaka University, Suita, Japan.
Yoshiharu MatsuuraDepartment of Molecular Virology, Research Institute for Microbial Diseases, Osaka University, Suita, Japan.
Hironori NakagamiDepartment of Health Development and Medicine, Osaka University Graduate School of Medicine, Suita, Japan. nakagami@gts.med.osaka-u.ac.jp.
Osaka University · JPOsaka City University · JPOsaka University Hospital · JP

Funding

the Japan Agency for Medical Research and Development JP20nk0101602
6 · The paper itself

Abstract

The aim of this study is to understand adaptive immunity to SARS-CoV-2 through the analysis of B cell epitope and neutralizing activity in coronavirus disease 2019 (COVID-19) patients. We obtained serum from forty-three COVID-19 patients from patients in the intensive care unit of Osaka University Hospital (n = 12) and in Osaka City Juso Hospital (n = 31). Most individuals revealed neutralizing activity against SARS-CoV-2 assessed by a pseudotype virus-neutralizing assay. The antibody production against the spike glycoprotein (S protein) or receptor-binding domain (RBD) of SARS-CoV-2 was elevated, with large individual differences, as assessed by ELISA. We observed the correlation between neutralizing antibody titer and IgG, but not IgM, antibody titer of COVID-19 patients. In the analysis of the predicted the linear B cell epitopes, hot spots in the N-terminal domain of the S protein were observed in the serum from patients in the intensive care unit of Osaka University Hospital. Overall, the analysis of antibody production and B cell epitopes of the S protein from patient serum may provide a novel target for the vaccine development against SARS-CoV-2.

Indexed as

Immunity, HumoralAmino Acid SequenceAntibodies, NeutralizingAntibodies, ViralCOVID-19Enzyme-Linked Immunosorbent AssayEpitopes, B-LymphocyteFemaleHost-Pathogen InteractionsHumansMaleSARS-CoV-2Spike Glycoprotein, CoronavirusAntibodies, NeutralizingAntibodies, ViralEpitopes, B-LymphocyteSpike Glycoprotein, Coronavirus

Identifiers

PMID33723294
PMCPMC7960719
OpenAlexW3139029545

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.