Evidence map›Paper›PMID 33722979›Full record

ArticleJournal of cell science2021

A robust and flexible CRISPR/Cas9-based system for neutrophil-specific gene inactivation in zebrafish.

Yueyang Wang, Alan Y Hsu, Eric M Walton, Sung Jun Park, Ramizah Syahirah, Tianqi Wang, Wenqing Zhou, Chang Ding, Abby Pei Lemke, GuangJun Zhang and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. RABEP1 amplifies front signaling in neutrophil migration.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Evolution of two-pore domain potassium channels and their gene expression in zebrafish embryos.Developmental dynamics : an official publication of the American Association of Anatomists · 2024
    Article
  6. Review
  7. Review
  8. Evolution of inwardly rectifying potassium channels and their gene expression in zebrafish embryos.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Yueyang WangDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Alan Y HsuDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Eric M WaltonDepartment of Molecular Genetics and Microbiology, and Immunology, Duke University School of Medicine, Durham, NC 27710, USA.
Sung Jun ParkDepartment of Comparative Pathobiology, Purdue University, West Lafayette, IN 47907, USA.
Ramizah SyahirahDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Tianqi WangDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Wenqing ZhouDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Chang DingDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Abby Pei LemkeDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
GuangJun ZhangDepartment of Comparative Pathobiology, Purdue University, West Lafayette, IN 47907, USA.
David M TobinDepartment of Molecular Genetics and Microbiology, and Immunology, Duke University School of Medicine, Durham, NC 27710, USA.
Qing DengDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Purdue University West Lafayette · USDuke University · US

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI Andrea L Kasinski · 1985 to 2026
$43.4M
Role of microRNAs in neutrophil migrationR35GM119787 · NIGMS · PURDUE UNIVERSITY · PI Qing Deng · 2016 to 2026
$4.9M
Macrophage Reprogramming During Granuloma Formation in the ZebrafishR01AI130236 · NIAID · DUKE UNIVERSITY · PI David M. Tobin · 2017 to 2026
$4.5M
Genetic dissection of angiogenesis in the tuberculous granulomaR01AI125517 · NIAID · DUKE UNIVERSITY · PI David M. Tobin · 2017 to 2026
$4.4M
Roles of ion-channel mediated bioelectricity in developmental patterningR35GM124913 · NIGMS · PURDUE UNIVERSITY · PI GuangJun Zhang · 2017 to 2026
$4.2M
The Genetic Basis of Bone Disease in Mycobacterial InfectionR01AI127715 · NIAID · DUKE UNIVERSITY · PI Clare Margaret Smith, David M. Tobin · 2017 to 2026
$3.3M
NCI NIH HHS P30 CA023168NIAID NIH HHS R01 AI125517NIAID NIH HHS R01 AI127715NIAID NIH HHS R01 AI130236NIGMS NIH HHS R35 GM119787NIGMS NIH HHS R35 GM124913
6 · The paper itself

Abstract

CRISPR/Cas9-based tissue-specific knockout techniques are essential for probing the functions of genes in embryonic development and disease using zebrafish. However, the lack of capacity to perform gene-specific rescue or live imaging in the tissue-specific knockout background has limited the utility of this approach. Here, we report a robust and flexible gateway system for tissue-specific gene inactivation in neutrophils. Using a transgenic fish line with neutrophil-restricted expression of Cas9 and ubiquitous expression of single guide (sg)RNAs targeting rac2, specific disruption of the rac2 gene in neutrophils is achieved. Transient expression of sgRNAs targeting rac2 or cdk2 in the neutrophil-restricted Cas9 line also results in significantly decreased cell motility. Re-expressing sgRNA-resistant rac2 or cdk2 genes restores neutrophil motility in the corresponding knockout background. Moreover, active Rac and force-bearing F-actins localize to both the cell front and the contracting tail during neutrophil interstitial migration in an oscillating fashion that is disrupted when rac2 is knocked out. Together, our work provides a potent tool that can be used to advance the utility of zebrafish in identifying and characterizing gene functions in a tissue-specific manner.

Indexed as

NeutrophilsZebrafishAnimalsAnimals, Genetically ModifiedClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas Systemsrac GTP-Binding ProteinsZebrafish ProteinsRac2 protein, zebrafishrac GTP-Binding ProteinsZebrafish ProteinsActin stressCell migrationLeukocytesLive imagingRac2

Identifiers

PMID33722979
PMCPMC8084575
OpenAlexW3138093154

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.