Evidence map›Paper›PMID 33720766›Full record

ArticleJournal of computational biology : a journal of computational molecular cell biology2021

Toward a Three-Dimensional Chromosome Shape Alphabet.

Carlos Soto, Darshan Bryner, Nicola Neretti, Anuj Srivastava

Abstract read
In one paragraph

Article in Journal of computational biology : a journal of computational molecular cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Carlos SotoDepartment of Statistics, Florida State University, Tallahassee, Florida, USA.
Darshan BrynerNaval Surface Warfare Center Panama City Division, Panama City, Florida, USA.
Nicola NerettiDepartment of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, Rhode Island, USA.
Anuj SrivastavaDepartment of Statistics, Florida State University, Tallahassee, Florida, USA.

Funding

The second phase of NIH Common Fund 4D Nucleome Network Organizational HubU01CA200147 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ZHONG, SHENG · 2015 to 2024
$22.0M
The Role of Somatic Transposition in Age-associated Genomic InstabilityR01AG050582 · NIA · BROWN UNIVERSITY · PI NERETTI, NICOLA, SEDIVY, JOHN M · 2017 to 2022
$2.2M
Collaborative Research: Mathematical Framework for Biomolecules: From Protein to RNA to ChromosomesR01GM126558 · NIGMS · FLORIDA STATE UNIVERSITY · PI ZHANG, JINFENG · 2017 to 2021
$1.5M
NCI NIH HHS U01 CA200147NIA NIH HHS R01 AG050582NIGMS NIH HHS R01 GM126558
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

AnimalsChromosomesChromosome StructuresComputational BiologyHumanschromosome structuresshape analysisshape lettersstructural representationsstructural variabilityTAD segmentation

Identifiers

PMID33720766
PMCPMC8219198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.