Evidence map›Paper›PMID 33720523›Full record

ArticleMicrobial biotechnology2021

Attenuator LRR - a regulatory tool for modulating gene expression in Gram-positive bacteria.

Xia Cai, Qian Wang, Yu Fang, Die Yao, Yunda Zhan, Baoju An, Bing Yan, Jun Cai

Abstract read
In one paragraph

Article in Microbial biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xia CaiDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, 300071, China.ORCID 0000-0001-8428-2487
Qian WangDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, 300071, China.
Yu FangDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, 300071, China.
Die YaoDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, 300071, China.
Yunda ZhanDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, 300071, China.
Baoju AnDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, 300071, China.
Bing YanDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, 300071, China.
Jun CaiDepartment of Microbiology, College of Life Sciences, Nankai University, Tianjin, 300071, China.ORCID 0000-0002-5194-3629

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With the rapid development of synthetic biology in recent years, particular attention has been paid to RNA devices, especially riboswitches, because of their significant and diverse regulatory roles in prokaryotic and eukaryotic cells. Due to the limited performance and context-dependence of riboswitches, only a few of them (such as theophylline, tetracycline and ciprofloxacin riboswitches) have been utilized as regulatory tools in biotechnology. In the present study, we demonstrated that a ribosome-dependent ribo-regulator, LRR, discovered in our previous work, exhibits an attractive regulatory performance. Specifically, it offers a 60-fold change in expression in the presence of retapamulin and a low level of leaky expression of about 1-2% without antibiotics. Moreover, LRR can be combined with different promoters and performs well in Bacillus thuringiensis, B. cereus, B. amyloliquefaciens, and B. subtilis. Additionally, LRR also functions in the Gram-negative bacterium Escherichia coli. Furthermore, we demonstrate its ability to control melanin metabolism in B. thuringiensis BMB171. Our results show that LRR can be applied to regulate gene expression, construct genetic circuits and tune metabolic pathways, and has great potential for many applications in synthetic biology.

Indexed as

Bacillus thuringiensisRiboswitchGene ExpressionGene Expression Regulation, BacterialRibosomesRiboswitch

Identifiers

PMID33720523
PMCPMC8601186

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.