ArticleFrontiers in plant science2021
Transcriptome Analysis Reveals Photoperiod-Associated Genes Expressed in Rice Anthers.
Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed, 22 citations in OpenAlex.
- Genome-Wide Association Study of Yield-Related Traits and Photoperiod Response in Rice.Plants (Basel, Switzerland) · 2026Article
- Unraveling the Genetic Architecture of Photoperiod Sensitivity in Myanmar Rice Landraces Through Integrated GWAS and Transcriptome Analysis.International journal of molecular sciences · 2026Article
- mRNA-miRNA analyses reveal the involvement of CsbHLH1 and miR1446a in the regulation of caffeine biosynthesis inHorticulture research · 2024Article
- Rice HEAT SHOCK PROTEIN60-3B maintains male fertility under high temperature by starch granule biogenesis.Plant physiology · 2023Article
- Gene Expression in the Developing Seed of Wild and Domesticated Rice.International journal of molecular sciences · 2022Article
- The regulatory role of CARBON STARVED ANTHER-mediated photoperiod-dependent male fertility in rice.Plant physiology · 2022Article
- Article
- Understanding plant-microbe interaction of rice and soybean with two contrasting diazotrophic bacteria through comparative transcriptome analysis.Frontiers in plant science · 2022Article
- Carbon Starved Anther modulates sugar and ABA metabolism to protect rice seed germination and seedling fitness.Plant physiology · 2021Article
- Integrative Identification of Crucial Genes Associated With Plant Hormone-Mediated Bud Dormancy inFrontiers in genetics · 2021Article
- Integrated Lipidomic and Transcriptomic Analysis Reveals Lipid Metabolism in Foxtail Millet (Frontiers in genetics · 2021Article
- Construction and Analysis of Coexpression Network to Understand Biological Responses in Chickens Infected byFrontiers in veterinary science · 2021Article
Corrections and comments
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Authors and funding
9 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Environmental conditions, such as photoperiod and temperature, can affect male fertility in plants. While this feature is heavily exploited in rice to generate male-sterile lines for hybrid breeding, the underlying molecular mechanisms remain largely unknown. In this study, we use a transcriptomics approach to identify key genes and regulatory networks affecting pollen maturation in rice anthers in response to different day lengths. A total of 11,726 differentially expressed genes (DEGs) were revealed, of which 177 were differentially expressed at six time points over a 24-h period. GO enrichment analysis revealed that genes at all time points were enriched in transport, carbohydrate, and lipid metabolic processes, and signaling pathways, particularly phytohormone signaling. In addition, co-expression network analysis revealed four modules strongly correlated with photoperiod. Within these four modules, 496 hub genes were identified with a high degree of connectivity to other photoperiod-sensitive DEGs, including two previously reported photoperiod- and temperature-sensitive genes affecting male fertility,
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