Evidence map›Paper›PMID 33713209›Full record

ArticleCurrent microbiology2021

Cross-Resistance and the Mechanisms of Cephalosporin-Resistant Bacteria in Urinary Tract Infections Isolated in Indonesia.

Aya Ishii, Katsumi Shigemura, Koichi Kitagawa, Mizuki Harada, Yuki Kan, Fuka Hayashi, Kayo Osawa, K Kuntaman, Toshiro Shirakawa, Masato Fujisawa

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Article in Current microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Multidrug-ResistantAntibiotics (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Aya IshiiDepartment of Public Health, Kobe University Graduate School of Health Sciences, Kobe, Japan.
Katsumi ShigemuraDepartment of Public Health, Kobe University Graduate School of Health Sciences, Kobe, Japan. katsumi@med.kobe-u.ac.jp.
Koichi KitagawaDepartment of Public Health, Kobe University Graduate School of Health Sciences, Kobe, Japan.
Mizuki HaradaCentral Laboratory Department, Local Independent Administrative Agency, Rinkuu General Medical Center, Osaka, Japan.
Yuki KanDepartment of Medical Technology, School of Medicine Faculty of Health Sciences, Kobe University, Kobe, Japan.
Fuka HayashiDepartment of Medical Technology, School of Medicine Faculty of Health Sciences, Kobe University, Kobe, Japan.
Kayo OsawaDepartment of Medical Technology, Kobe Tokiwa University, Kobe, Japan.
K KuntamanDepartment of Microbiology, Faculty of Medicine, Airlangga University, Surabaya, Indonesia.
Toshiro ShirakawaDepartment of Public Health, Kobe University Graduate School of Health Sciences, Kobe, Japan.
Masato FujisawaDepartment of Urology, Kobe University Graduate School of Medicine, Kobe, Japan.
Kobe University · JPAirlangga University · IDKobe Tokiwa University · JP

Funding

Japan Agency for Medical Research and Development (AMED) 18K10045Japan Agency for Medical Research and Development (AMED) 19K09670Japan Initiative for Global Research Network on Infectious Diseases (J-GRID) from the Ministry of Education, Culture, Sport, Science and Technology in Japan 18fm0108004h0004
6 · The paper itself

Abstract

Urinary tract infection (UTI) by antibiotic-resistant strains has become increasingly problematic, with trends that differ from country to country. This study examined cross-resistance and the mechanisms of cephalosporin resistance in UTI-causative bacteria isolated in Indonesia. Antibiotic susceptibility tests based on Clinical Laboratory Standards Institute (CLSI) standards were done for UTI-causative strains (n = 50) isolated from patients in Indonesia in 2015-2016 and showed resistance against the third-generation cephalosporin. Mechanistic studies were carried out to confirm the presence of extended-spectrum β-lactamase (ESBL) genes, carbapenemase-related genes, the fosA3 gene related to fosfomycin resistance, and mutations of quinolone-resistance-related genes. Isolated UTI-causative bacteria included Escherichia coli (64.0%), Pseudomonas aeruginosa (16.0%), Klebsiella pneumoniae (10.0%), and others (10.0%). These strains showed 96.0% susceptibility to amikacin, 76.0% to fosfomycin, 90.0% to imipenem, 28.0% to levofloxacin, 92.0% to meropenem, and 74.0% to tazobactam/piperacillin. ESBL was produced by 68.0% of these strains. Mechanistic studies found no strains with carbapenemase genes but 6.0% of strains had the fosA3 gene. Seventy-two % of the strains had mutations in the gyrA gene and 74.0% in the parC gene. Most E. coli strains (87.5%) had Ser-83 → Leu and Asp-87 → Asn in gyrA and 93.8% of E. coli had Ser-80 → Ile in parC. There were significant correlations among mutations in gyrA and parC, and fosA3 gene detection (P < 0.05), respectively. To our knowledge, this is the first mechanistic study of antibiotic-cross-resistant UTI-causative bacteria in Indonesia. Further studies with a longer period of observation are necessary, especially for changes in carbapenem resistance without carbapenemase-related genes.

Indexed as

Escherichia coli InfectionsUrinary Tract InfectionsAnti-Bacterial Agentsbeta-LactamasesCephalosporinsEscherichia coliHumansIndonesiaMicrobial Sensitivity TestsAnti-Bacterial Agentsbeta-LactamasesCephalosporins

Identifiers

PMID33713209
OpenAlexW3135793283

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.