Evidence map›Paper›PMID 33713133›Full record

ArticleMolecular biology and evolution2021

The Counteracting Effects of Demography on Functional Genomic Variation: The Roma Paradigm.

Neus Font-Porterias, Rocio Caro-Consuegra, Marcel Lucas-Sánchez, Marie Lopez, Aaron Giménez, Annabel Carballo-Mesa, Elena Bosch, Francesc Calafell, Lluís Quintana-Murci, David Comas

Open access · goldAbstract read
In one paragraph

Article in Molecular biology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Neus Font-PorteriasDepartament de Ciències Experimentals i de la Salut, Institut de Biologia Evolutiva (UPF-CSIC), Universitat Pompeu Fabra, Barcelona, Spain.
Rocio Caro-ConsuegraDepartament de Ciències Experimentals i de la Salut, Institut de Biologia Evolutiva (UPF-CSIC), Universitat Pompeu Fabra, Barcelona, Spain.
Marcel Lucas-SánchezDepartament de Ciències Experimentals i de la Salut, Institut de Biologia Evolutiva (UPF-CSIC), Universitat Pompeu Fabra, Barcelona, Spain.
Marie LopezHuman Evolutionary Genetics Unit, Institut Pasteur, UMR2000, CNRS, Paris, France.
Aaron GiménezFacultat de Sociologia, Universitat Autònoma de Barcelona, Barcelona, Spain.
Annabel Carballo-MesaFacultat de Geografia i Història, Universitat de Barcelona, Barcelona, Spain.
Elena BoschDepartament de Ciències Experimentals i de la Salut, Institut de Biologia Evolutiva (UPF-CSIC), Universitat Pompeu Fabra, Barcelona, Spain.
Francesc CalafellDepartament de Ciències Experimentals i de la Salut, Institut de Biologia Evolutiva (UPF-CSIC), Universitat Pompeu Fabra, Barcelona, Spain.ORCID 0000-0002-1083-9438
Lluís Quintana-MurciHuman Evolutionary Genetics Unit, Institut Pasteur, UMR2000, CNRS, Paris, France.
David ComasDepartament de Ciències Experimentals i de la Salut, Institut de Biologia Evolutiva (UPF-CSIC), Universitat Pompeu Fabra, Barcelona, Spain.ORCID 0000-0002-5075-0956
Universitat Pompeu Fabra · ESCentre National de la Recherche Scientifique · FRUniversitat Autònoma de Barcelona · ESUniversitat de Barcelona · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Demographic history plays a major role in shaping the distribution of genomic variation. Yet the interaction between different demographic forces and their effects in the genomes is not fully resolved in human populations. Here, we focus on the Roma population, the largest transnational ethnic minority in Europe. They have a South Asian origin and their demographic history is characterized by recent dispersals, multiple founder events, and extensive gene flow from non-Roma groups. Through the analyses of new high-coverage whole exome sequences and genome-wide array data for 89 Iberian Roma individuals together with forward simulations, we show that founder effects have reduced their genetic diversity and proportion of rare variants, gene flow has counteracted the increase in mutational load, runs of homozygosity show ancestry-specific patterns of accumulation of deleterious homozygotes, and selection signals primarily derive from preadmixture adaptation in the Roma population sources. The present study shows how two demographic forces, bottlenecks and admixture, act in opposite directions and have long-term balancing effects on the Roma genomes. Understanding how demography and gene flow shape the genome of an admixed population provides an opportunity to elucidate how genomic variation is modeled in human populations.

Indexed as

DemographyFounder EffectGenetic VariationGenome, HumanAdaptation, BiologicalHumansMutation AccumulationRomani PeopleSelection, Geneticadaptationadmixturedemographyexomesmutational loadRoma

Identifiers

PMID33713133
PMCPMC8233508
OpenAlexW3135816128

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.