Evidence map›Paper›PMID 33713117›Full record

ArticleG3 (Bethesda, Md.)2021

A genetic screen for temperature-sensitive morphogenesis-defective Caenorhabditis elegans mutants.

Molly C Jud, Josh Lowry, Thalia Padilla, Erin Clifford, Yuqi Yang, Francesca Fennell, Alexander K Miller, Danielle Hamill, Austin M Harvey, Martha Avila-Zavala and 4 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 63% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. TaoChongBao: a large-scaleLife science alliance · 2026
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Molly C JudInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Josh LowryInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Thalia PadillaInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Erin CliffordInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Yuqi YangInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Francesca FennellInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Alexander K MillerInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Danielle HamillDepartment of Zoology, Ohio Wesleyan University, Delaware, OH, 43015, USA.
Austin M HarveyInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Martha Avila-ZavalaInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
Hong ShaoDevelopmental Biology Program, Sloan Kettering Institute, New York, NY, 10065, USA.
Nhan Nguyen TranDevelopmental Biology Program, Sloan Kettering Institute, New York, NY, 10065, USA.
Zhirong BaoDevelopmental Biology Program, Sloan Kettering Institute, New York, NY, 10065, USA.
Bruce BowermanInstitute of Molecular Biology, University of Oregon, Eugene, OR, 97402, USA.
University of Oregon · USKettering University · USOhio Wesleyan University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007348 · NICHD · UNIVERSITY OF OREGON · PI Chris Q Doe, KRYN STANKUNAS · 1989 to 2026
$6.8M
Mitotic Spindle Assembly & Function in C. elegans - Equipment SupplementR01GM049869 · NIGMS · UNIVERSITY OF OREGON · PI BOWERMAN, BRUCE A · 1994 to 2019
$6.5M
Cytoskeletal Function in C. elegans EmbryosR35GM131749 · NIGMS · UNIVERSITY OF OREGON · PI BRUCE A BOWERMAN · 2019 to 2026
$4.8M
Systems Analysis of Conditional C. elegans Mutants with Late Embryonic DefectsR01GM114053 · NIGMS · UNIVERSITY OF OREGON · PI BOWERMAN, BRUCE A · 2015 to 2018
$1.3M
NICHD R25 Summer Research Program at the University of OregonR25HD070817 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 2011 to 2021
$1.1M
Genetic Pathways that Regulate Epidermal Enclosure and Elongation during C. elegans Embryonic MorphogenesisF32GM126677 · NIGMS · UNIVERSITY OF OREGON · PI JUD, MOLLY C · 2017 to 2018
$118k
NCI NIH HHS P30 CA008748NICHD NIH HHS R25 HD070817NICHD NIH HHS T32 HD007348NIGMS NIH HHS F32 GM126677NIGMS NIH HHS R01 GM049869NIGMS NIH HHS R01 GM114053NIGMS NIH HHS R35 GM131749NIH HHS P40 OD010440
6 · The paper itself

Abstract

Morphogenesis involves coordinated cell migrations and cell shape changes that generate tissues and organs, and organize the body plan. Cell adhesion and the cytoskeleton are important for executing morphogenesis, but their regulation remains poorly understood. As genes required for embryonic morphogenesis may have earlier roles in development, temperature-sensitive embryonic-lethal mutations are useful tools for investigating this process. From a collection of ∼200 such Caenorhabditis elegans mutants, we have identified 17 that have highly penetrant embryonic morphogenesis defects after upshifts from the permissive to the restrictive temperature, just prior to the cell shape changes that mediate elongation of the ovoid embryo into a vermiform larva. Using whole genome sequencing, we identified the causal mutations in seven affected genes. These include three genes that have roles in producing the extracellular matrix, which is known to affect the morphogenesis of epithelial tissues in multicellular organisms: the rib-1 and rib-2 genes encode glycosyltransferases, and the emb-9 gene encodes a collagen subunit. We also used live imaging to characterize epidermal cell shape dynamics in one mutant, or1219ts, and observed cell elongation defects during dorsal intercalation and ventral enclosure that may be responsible for the body elongation defects. These results indicate that our screen has identified factors that influence morphogenesis and provides a platform for advancing our understanding of this fundamental biological process.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsEpidermisMorphogenesisTemperatureCaenorhabditis elegans ProteinsC. elegans embryonic morphogenesiscollagenepidermal cellsextracellular matrixglycosyltransferase

Identifiers

PMID33713117
PMCPMC8133775
OpenAlexW3135755667

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.