Evidence map›Paper›PMID 33712730›Full record

ArticleCommunications biology2021

A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology.

Sara Calhoun, Tisza Ann Szeremy Bell, Lukas R Dahlin, Yuliya Kunde, Kurt LaButti, Katherine B Louie, Andrea Kuftin, Daniel Treen, David Dilworth, Sirma Mihaltcheva and 6 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 54 citations in OpenAlex.

  1. Draft genome assembly and annotation ofMicrobiology resource announcements · 2026
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  12. Growth Characteristics of aLife (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Sara Calhoun *US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0003-2942-1338
Tisza Ann Szeremy Bell *Applied Genomics Team, Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM, USA.ORCID http://orcid.org/0000-0002-2773-400X
Lukas R Dahlin *National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, USA.ORCID http://orcid.org/0000-0001-6097-4518
Yuliya KundeApplied Genomics Team, Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Kurt LaButtiUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-5838-1972
Katherine B LouieUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-6787-7558
Andrea KuftinUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Daniel TreenUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-8896-0000
David DilworthUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-0806-0302
Sirma MihaltchevaUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Christopher DaumUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0003-3895-5892
Benjamin P BowenUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0003-1368-3958
Trent R NorthenUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0001-8404-3259
Michael T GuarnieriNational Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, USA.ORCID http://orcid.org/0000-0003-1403-9689
Shawn R StarkenburgApplied Genomics Team, Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM, USA. shawns@lanl.gov.ORCID http://orcid.org/0000-0002-8564-1274
Igor V GrigorievUS Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. ivgrigoriev@lbl.gov.ORCID http://orcid.org/0000-0002-3136-8903
Lawrence Berkeley National Laboratory · USLos Alamos National Laboratory · USNational Laboratory of the Rockies · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microalgae efficiently convert sunlight into lipids and carbohydrates, offering bio-based alternatives for energy and chemical production. Improving algal productivity and robustness against abiotic stress requires a systems level characterization enabled by functional genomics. Here, we characterize a halotolerant microalga Scenedesmus sp. NREL 46B-D3 demonstrating peak growth near 25 °C that reaches 30 g/m

Indexed as

Gene Expression ProfilingGenomeMetabolomicsTemperatureAmino AcidsAntiportersBiomassEnergy MetabolismFatty AcidsGene Expression RegulationIon ChannelsLipogenesisMetabolomeMicroalgaeSalt ToleranceScenedesmusAmino AcidsAntiportersFatty AcidsIon ChannelsTranscription Factors

Identifiers

PMID33712730
PMCPMC7955037
OpenAlexW3134274179

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.