Evidence map›Paper›PMID 33709221›Full record

ArticleWorld journal of microbiology & biotechnology2021

Application of a dissolved oxygen control strategy to increase the expression of Streptococcus suis glutamate dehydrogenase in Escherichia coli.

Likun Cheng, Chunguang Zhao, Xiuyan Yang, Zheng Song, Chuwen Lin, Xiubao Zhao, Jinliang Wang, Jing Wang, Lei Wang, Xiaojing Xia and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in World journal of microbiology & biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Likun Cheng *Shandong Research Center of High Cell Density Fermentation and Efficient Expression Technology, Shandong Lvdu Bio-Science and Technology Co., Ltd., Shandong Binzhou Animal Science and Veterinary Medicine Academy, Binzhou, 256600, China. 13854359698@126.com.
Chunguang Zhao *Research and Development Center, Ningxia Eppen Biotech Co., Ltd., Yinchuan, 750000, China.
Xiuyan YangShandong Research Center of High Cell Density Fermentation and Efficient Expression Technology, Shandong Lvdu Bio-Science and Technology Co., Ltd., Shandong Binzhou Animal Science and Veterinary Medicine Academy, Binzhou, 256600, China.
Zheng SongDepartment of Clinical Pharmacy, Affiliated Hospital of Binzhou Medical University, Binzhou, 256600, China.
Chuwen LinShandong Research Center of High Cell Density Fermentation and Efficient Expression Technology, Shandong Lvdu Bio-Science and Technology Co., Ltd., Shandong Binzhou Animal Science and Veterinary Medicine Academy, Binzhou, 256600, China.
Xiubao ZhaoShandong Research Center of High Cell Density Fermentation and Efficient Expression Technology, Shandong Lvdu Bio-Science and Technology Co., Ltd., Shandong Binzhou Animal Science and Veterinary Medicine Academy, Binzhou, 256600, China.
Jinliang WangShandong Research Center of High Cell Density Fermentation and Efficient Expression Technology, Shandong Lvdu Bio-Science and Technology Co., Ltd., Shandong Binzhou Animal Science and Veterinary Medicine Academy, Binzhou, 256600, China.
Jing WangDepartment of Clinical Pharmacy, Affiliated Hospital of Binzhou Medical University, Binzhou, 256600, China.
Lei WangCollege of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, 453003, China.
Xiaojing XiaCollege of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, 453003, China.ORCID http://orcid.org/0000-0001-7717-8411
Zhiqiang ShenShandong Research Center of High Cell Density Fermentation and Efficient Expression Technology, Shandong Lvdu Bio-Science and Technology Co., Ltd., Shandong Binzhou Animal Science and Veterinary Medicine Academy, Binzhou, 256600, China.
Binzhou Medical University · CNHenan Institute of Science and Technology · CNNingxia Water Conservancy · CNShandong Binzhou Pasturage Veterinary Academy · CN

Funding

Major Science and Technology Innovation Project of Shandong 2019JZZY020606the Development of Science and Technology Plan Program of Binzhou 2015ZC0107the Key Specialized Research and Development Breakthrough program in Henan province 202102110101the National Natural Science Foundation of China 31702263the Technological Innovation Project of Shandong 201741916018the Youth Backbone Teacher Project of Colleges and Universities of Henan Province 2020GGJS163Young Talent Lifting Project in Henan Province 2020HYTP041Young Talent Lifting Project in Henan Province 2021HYTP038
6 · The paper itself

Abstract

The accumulation of acetate in Escherichia coli inhibits cell growth and desired protein synthesis, and cell density and protein expression are increased by reduction of acetate excretion. Dissolved oxygen (DO) is an important parameter for acetate synthesis, and the accumulation of acetate is inversely correlated to DO level. In this study, the effect of DO levels on glutamate dehydrogenase (GDH) expression was investigated, and then different DO control strategies were tested for effects on GDH expression. DO control strategy IV (50% 0-9 h, 30% 9-18 h) provided the highest cell density (15.43 g/L) and GDH concentration (3.42 g/L), values 1.59- and 1.99-times higher than those achieved at 10% DO. The accumulation of acetate was 2.24 g/L with DO control strategy IV, a decrease of 40.74% relative to that achieved for growth at 10% DO. Additionally, under DO control strategy IV, there was lower expression of PoxB, a key enzyme for acetate synthesis, at both the transcriptional and translational level. At the same time, higher transcription and protein expression levels were observed for a glyoxylate shunt gene (aceA), an acetate uptake gene (acs), gluconeogensis and anaplerotic pathways genes (pckA, ppsA, ppc, and sfcA), and a TCA cycle gene (gltA). The flux of acetate with DO strategy IV was 8.4%, a decrease of 62.33% compared with the flux at 10% DO. This decrease represents both lower flux for acetate synthesis and increased flux of reused acetate.

Indexed as

Gene Expression Regulation, BacterialAcetatesCitric Acid CycleEscherichia coliEscherichia coli ProteinsFermentationGene Expression ProfilingGlutamate DehydrogenaseMetabolic Flux AnalysisOxygenStreptococcus suisTranscriptomeAcetatesEscherichia coli ProteinsGlutamate DehydrogenaseOxygenAcetateDissolved oxygenEscherichia coliGlutamate dehydrogenaseStreptococcus suis

Identifiers

PMID33709221
OpenAlexW3135854859

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.