Evidence map›Paper›PMID 33708826›Full record

ArticleAnnals of translational medicine2021

Profiles of differentially expressed long noncoding RNAs and messenger RNAs in the myocardium of septic mice.

Chengbao Li, Yongchao Liu, Jing Qin, Yuhao Liu, Lijie Ma, Shouqin Zhang, Junjie Wang, Sheng Wang

Open access · diamondAbstract read
In one paragraph

Article in Annals of translational medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. [Inhibiting ferroptosis attenuates myocardial injury in septic mice: the role of lipocalin-2].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chengbao LiDepartment of Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University, Shanghai, China.
Yongchao LiuDepartment of Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University, Shanghai, China.
Jing QinDepartment of Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University, Shanghai, China.
Yuhao LiuDepartment of Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University, Shanghai, China.
Lijie MaDepartment of Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University, Shanghai, China.
Shouqin ZhangDepartment of Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University, Shanghai, China.
Junjie WangDepartment of Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University, Shanghai, China.
Sheng WangDepartment of Critical Care Medicine, Shanghai Tenth People's Hospital, Tongji University, Shanghai, China.
Tongji University · CNShanghai Tenth People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSepsis is the primary cause of mortality in the intensive care unit (ICU), mainly due to sepsis-induced dysfunction of essential organs such as the heart and lungs. This study investigated the myocardium's epigenetic characterization from septic mice to identify potential treatment targets for septic myocardial dysfunction.

methodsCecal ligation and puncture (CLP) was used to induce sepsis in male C57BL/6 mice. Hearts were collected 24 h after surgery to determine the expression profiles of long noncoding RNAs (lncRNAs) and messenger RNAs (mRNAs) by microarray. To validate the reliability of microarray results, we randomly chose six differentially expressed lncRNAs for qRT-PCR. Functional mapping of differentially expressed mRNAs was annotated with gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses; lncRNA-mRNA co-expression network was constructed to reveal connections between lncRNAs and mRNAs.

resultsMicroarray analysis indicated that 1,568 lncRNAs and 2,166 mRNAs were differentially expressed in the myocardium from septic mice, which was further confirmed by qRT-PCR. KEGG pathway analysis showed that numerous differentially expressed mRNAs were relevant to tumor necrosis factor (TNF) and phosphatidylinositol-3-kinase/protein kinase B (PI3K/Akt) signaling pathways. Moreover, according to the lncRNA-mRNA co-expression network constructed by the above six lncRNAs and their interacting mRNAs, the co-expression network profiles had 57 network nodes and 134 connections, including 76 positive interactions and 58 negative interactions.

conclusionsIn mouse hearts, sepsis resulted in differential expression of lncRNAs and mRNAs related to TNF and PI3K-Akt signaling pathways, suggesting that lncRNAs and their interacting mRNAs may participate in the pathogenesis of septic myocardial dysfunction by regulating TNF and PI3K-Akt signaling pathways.

Indexed as

long noncoding RNAs (lncRNAs)messenger RNAs (mRNAs)microarraymyocardial dysfunctionSepsis

Identifiers

PMID33708826
PMCPMC7940873
OpenAlexW3126181341

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.