Evidence map›Paper›PMID 33707557›Full record

ArticleScientific reports2021

Exploring genetic alterations in circulating tumor DNA from cerebrospinal fluid of pediatric medulloblastoma.

Yanling Sun, Miao Li, Siqi Ren, Yan Liu, Jin Zhang, Shuting Li, Wenchao Gao, Xiaojun Gong, Jingjing Liu, Yuan Wang and 4 more

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
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  14. Current Strategies for Management of Medulloblastoma.Diagnostics (Basel, Switzerland) · 2023
    Review
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  16. Cell-free DNA-based liquid biopsies in neurology.Brain : a journal of neurology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Yanling SunDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Miao LiDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Siqi RenDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Yan LiuDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Jin ZhangDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Shuting LiDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Wenchao GaoDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Xiaojun GongDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Jingjing LiuDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Yuan WangDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Shuxu DuDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Liming SunDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China.
Wanshui WuDepartment of Pediatrics, Beijing Shijitan Hospital, Capital Medical University, 10E. Tieyi Road, Yangfangdian, Haidian District, Beijing, China. wuwanshui2018@ccmu.edu.cn.
Yongji TianDepartment of Pediatric Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, 119E. South Fourth Ring West Road, Fengtai District, Beijing, China. tyjpumc@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Medulloblastoma (MB) is the most common type of brain malignancy in children. Molecular profiling has become an important component to select patients for therapeutic approaches, allowing for personalized therapy. In this study, we successfully identified detectable levels of tumor-derived cell-free DNA (cfDNA) in cerebrospinal fluid (CSF) samples of patients with MB. Furthermore, cfDNA from CSF can interrogate for tumor-associated molecular clues. MB-associated alterations from CSF, tumor, and post-chemotherapy plasma were compared by deep sequencing on next-generation sequencing platform. Shared alterations exist between CSF and matched tumor tissues. More alternations were detected in circulating tumor DNA from CSF than those in genomic DNA from primary tumor. It was feasible to detect MB-associated mutations in plasma of patients treated with chemotherapy. Collectively, CSF supernatant can be used to monitor genomic alterations, as a superior technique as long as tumor-derived cfDNA can be isolated from CSF successfully.

Indexed as

Genetic VariationAdolescentCerebellar NeoplasmsChildCirculating Tumor DNAFemaleGenome, HumanHumansMaleMedulloblastomaTime FactorsCirculating Tumor DNA

Identifiers

PMID33707557
PMCPMC7952732

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.