Evidence map›Paper›PMID 33704888›Full record

ArticleTransboundary and emerging diseases2021

Persistence of the historical lineage I of West Africa against the ongoing spread of the Asian lineage of peste des petits ruminants virus.

Kadidia Tounkara, Olivier Kwiatek, Cheick Abou Kounta Sidibe, Amadou Sery, Marthin Dakouo, Habib Salami, Modou Moustapha Lo, Aminata Ba, Mariame Diop, Mamadou Niang and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Transboundary and emerging diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Kadidia TounkaraCIRAD, UMR ASTRE, Montpellier, France.ORCID https://orcid.org/0000-0002-6291-9771
Olivier KwiatekCIRAD, UMR ASTRE, Montpellier, France.
Cheick Abou Kounta SidibeLaboratoire Central Vétérinaire (LCV), Bamako, Mali.
Amadou SeryLaboratoire Central Vétérinaire (LCV), Bamako, Mali.
Marthin DakouoLaboratoire Central Vétérinaire (LCV), Bamako, Mali.
Habib SalamiCIRAD, UMR ASTRE, Montpellier, France.
Modou Moustapha LoInstitut Sénégalais de Recherches Agricoles, Laboratoire National d'Elevage et de Recherches Vétérinaires (LNERV), Dakar-Hann, Sénégal.
Aminata BaInstitut Sénégalais de Recherches Agricoles, Laboratoire National d'Elevage et de Recherches Vétérinaires (LNERV), Dakar-Hann, Sénégal.
Mariame DiopInstitut Sénégalais de Recherches Agricoles, Laboratoire National d'Elevage et de Recherches Vétérinaires (LNERV), Dakar-Hann, Sénégal.
Mamadou NiangLaboratoire Central Vétérinaire (LCV), Bamako, Mali.
Geneviève LibeauCIRAD, UMR ASTRE, Montpellier, France.
Arnaud BatailleCIRAD, UMR ASTRE, Montpellier, France.ORCID https://orcid.org/0000-0002-3508-2144
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRMali-Folkecenter · MLInstitut Sénégalais de Recherches Agricoles · SN

Funding

the European Union Reference Laboratory for peste des petits ruminants (EURL-PPR) SI2.756606
6 · The paper itself

Abstract

Peste des petits ruminants (PPR) is a highly contagious disease of small ruminants. The causal agent, PPR virus (PPRV), is classified into four genetically distinct lineages. Lineage IV, originally from Asia, has shown a unique capacity to spread across Asia, the Middle East and Africa. Recent studies have reported its presence in two West African countries: Nigeria and Niger. Animals are frequently exchanged between Mali and Niger, which could allow the virus to enter and progress in Mali and to other West African countries. Here, PPRV samples were collected from sick goats between 2014 and 2017 in both Mali and in Senegal, on the border with Mali. Partial PPRV nucleoprotein gene was sequenced to identify the genetic lineage of the strains. Our results showed that lineage IV was present in south-eastern Mali in 2017. This is currently the furthest West the lineage has been detected in West Africa. Surprisingly, we identified the persistence at least until 2014 of the supposedly extinct lineage I in two regions of Mali, Segou and Sikasso. Most PPRV sequences obtained in this study belonged to lineage II, which is dominant in West Africa. Phylogenetic analyses showed a close relationship between sequences obtained at the border between Senegal and Mali, supporting the hypothesis of an important movement of the virus between the two countries. Understanding the movement of animals between these countries, where the livestock trade is not fully controlled, is very important in the design of efficient control strategies to combat this devastating disease.

Indexed as

Goat DiseasesPeste-des-Petits-RuminantsPeste-des-petits-ruminants virusAfrica, WesternAnimalsGoatsNigeriaPhylogenydisease controlmolecular epidemiologyMorbillivirusphylogenysmall ruminanttransboundary

Identifiers

PMID33704888
PMCPMC9292845
OpenAlexW3135298613

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.