Evidence map›Paper›PMID 33693822›Full record

ArticlePlant physiology2021

Phytochrome regulates cellular response plasticity and the basic molecular machinery of leaf development.

Andrés Romanowski, James J Furniss, Ejaz Hussain, Karen J Halliday

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

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  10. Whole-Genome Sequencing and Analysis of Tumour-Forming Radish (International journal of molecular sciences · 2024
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  16. PIF7 controls leaf cell proliferation through an AN3 substitution repression mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Andrés RomanowskiHalliday Lab, Institute of Molecular Plant Sciences (IMPS), King's Buildings, University of Edinburgh, Edinburgh, UK.ORCID 0000-0003-0737-2408
James J FurnissHalliday Lab, Institute of Molecular Plant Sciences (IMPS), King's Buildings, University of Edinburgh, Edinburgh, UK.ORCID 0000-0001-5643-2070
Ejaz HussainHalliday Lab, Institute of Molecular Plant Sciences (IMPS), King's Buildings, University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-1127-5582
Karen J HallidayHalliday Lab, Institute of Molecular Plant Sciences (IMPS), King's Buildings, University of Edinburgh, Edinburgh, UK.ORCID 0000-0003-0467-104X
University of Edinburgh · GBConsejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

Biotechnology and Biological Sciences Research Council BB/M025551/1Biotechnology and Biological Sciences Research Council BB/N005147/1
6 · The paper itself

Abstract

Plants are plastic organisms that optimize growth in response to a changing environment. This adaptive capability is regulated by external cues, including light, which provides vital information about the habitat. Phytochrome photoreceptors detect far-red light, indicative of nearby vegetation, and elicit the adaptive shade-avoidance syndrome (SAS), which is critical for plant survival. Plants exhibiting SAS are typically more elongated, with distinctive, small, narrow leaf blades. By applying SAS-inducing end-of-day far-red (EoD FR) treatments at different times during Arabidopsis (Arabidopsis thaliana) leaf 3 development, we have shown that SAS restricts leaf blade size through two distinct cellular strategies. Early SAS induction limits cell division, while later exposure limits cell expansion. This flexible strategy enables phytochromes to maintain control of leaf size through the proliferative and expansion phases of leaf growth. mRNAseq time course data, accessible through a community resource, coupled to a bioinformatics pipeline, identified pathways that underlie these dramatic changes in leaf growth. Phytochrome regulates a suite of major development pathways that control cell division, expansion, and cell fate. Further, phytochromes control cell proliferation through synchronous regulation of the cell cycle, DNA replication, DNA repair, and cytokinesis, and play an important role in sustaining ribosome biogenesis and translation throughout leaf development.

Indexed as

ArabidopsisArabidopsis ProteinsCell DivisionLightPhotoreceptors, PlantPhytochromePlant LeavesArabidopsis ProteinsPhotoreceptors, PlantPhytochrome

Identifiers

PMID33693822
PMCPMC8195529
OpenAlexW3134466065

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.