Evidence map›Paper›PMID 33688506›Full record

ArticleJournal of immunology research2021

IL-13 Augments Histone Demethylase JMJD2B/KDM4B Expression Levels, Activity, and Nuclear Translocation in Airway Fibroblasts in Asthma.

Khuloud Bajbouj, Mahmood Y Hachim, Rakhee K Ramakrishnan, Huwaida Fazel, Jumana Mustafa, Shahed Alzaghari, Mahmoud Eladl, Jasmin Shafarin, Ronald Olivenstein, Qutayba Hamid

Open access · goldAbstract read
In one paragraph

Article in Journal of immunology research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Khuloud BajboujCollege of Medicine, University of Sharjah, Sharjah, UAE.ORCID https://orcid.org/0000-0001-7344-6095
Mahmood Y HachimCollege of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, UAE.ORCID https://orcid.org/0000-0002-7096-0731
Rakhee K RamakrishnanCollege of Medicine, University of Sharjah, Sharjah, UAE.ORCID https://orcid.org/0000-0002-2991-3802
Huwaida FazelCollege of Medicine, University of Sharjah, Sharjah, UAE.ORCID https://orcid.org/0000-0002-0503-8433
Jumana MustafaCollege of Medicine, University of Sharjah, Sharjah, UAE.ORCID https://orcid.org/0000-0001-7077-6400
Shahed AlzaghariCollege of Medicine, University of Sharjah, Sharjah, UAE.ORCID https://orcid.org/0000-0001-5220-8047
Mahmoud EladlCollege of Medicine, University of Sharjah, Sharjah, UAE.ORCID https://orcid.org/0000-0002-1213-0211
Jasmin ShafarinSharjah Institute for Medical Research, University of Sharjah, Sharjah, UAE.ORCID https://orcid.org/0000-0002-8026-7340
Ronald OlivensteinMeakins-Christie Laboratories, McGill University, Montreal, QC, Canada.
Qutayba HamidCollege of Medicine, University of Sharjah, Sharjah, UAE.ORCID https://orcid.org/0000-0002-1107-190X
University of Sharjah · AEChristie (Canada) · CAMohammed Bin Rashid University of Medicine and Health Sciences · AE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeAsthma is one of the most common obstructive pulmonary diseases worldwide. Epigenetic alterations, including DNA methylation and histone modifications, have been reported to contribute to asthma pathogenesis. Since the inflammation mediator and remodeling trigger, IL-13, is known to play a central role in the pathophysiology of asthma, this study was aimed to identify novel IL-13-regulated epigenetic modifiers in asthma that may contribute to subepithelial fibrosis.

methodsPublicly available transcriptomic datasets from Gene Expression Omnibus (GEO) were used to identify differentially expressed genes on an epigenetic level upon IL-13 exposure in lung fibroblasts. Bronchial fibroblasts isolated from healthy and asthmatic individuals were assessed for the gene and protein expression levels of the identified gene at baseline and upon IL-13 treatment using qRT-PCR and western blotting, respectively. Its subcellular localization and tissue distribution were examined in bronchial fibroblasts as well as bronchial biopsies by immunofluorescence and immunohistochemical analysis, respectively.

resultsBioinformatic analysis revealed the differential expression of the histone demethylase JMJD2B/KDM4B, a well-known epigenetic modulator that leads to the demethylation of different lysine residues on histones, in IL-13-treated lung fibroblasts. The baseline expression levels of JMJD2B were higher in asthmatic fibroblasts and in bronchial biopsies in comparison to healthy ones. There was also an increase in JMJD2B activity as evidenced by the demethylation of its downstream target, H3K36me3. Furthermore, IL-13 stimulation induced JMJD2B expression and further demethylation of H3K36me3 in asthmatic fibroblasts. This was accompanied by increased translocation of JMJD2B into the nucleus.

conclusionThis study highlights the novel pathological involvement of the histone demethylase JMJD2B/KDM4B in asthmatic airway fibroblasts that are regulated by IL-13.

Indexed as

Gene Expression RegulationAsthmaBiopsyCell LineCell NucleolusFibroblastsHistonesHumansImmunohistochemistryInterleukin-13Jumonji Domain-Containing Histone DemethylasesMethylationProtein TransportHistonesInterleukin-13Jumonji Domain-Containing Histone DemethylasesKDM4B protein, human

Identifiers

PMID33688506
PMCPMC7920726
OpenAlexW3129394104

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.