Evidence map›Paper›PMID 33687433›Full record

ArticleBlood advances2021

Transcriptomic and genomic heterogeneity in blastic plasmacytoid dendritic cell neoplasms: from ontogeny to oncogenesis.

Florian Renosi, Anne Roggy, Ambre Giguelay, Lou Soret, Pierre-Julien Viailly, Meyling Cheok, Sabeha Biichle, Fanny Angelot-Delettre, Vahid Asnafi, Elizabeth Macintyre and 19 more

Open access · goldAbstract read
In one paragraph

Article in Blood advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 54 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 10 institutions in 4 countries.

Florian RenosiUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Anne RoggyEtablissement Français du Sang Bourgogne Franche-Comté, Laboratoire d'Hématologie et d'Immunologie Régional, Besançon, France.
Ambre GiguelayUniversité de Montpellier, INSERM, Institut Régional du Cancer de Montpellier, U1194, Institut de Recherche en Cancérologie de Montpellier, Montpellier, France.
Lou SoretUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Pierre-Julien ViaillyINSERM U1245, Centre Henri Becquerel, Rouen, France.
Meyling CheokUniversité Lille, Centre National de la Recherche Scientifique, INSERM, CHU Lille, UMR9020-U1277, Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France.
Sabeha BiichleUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Fanny Angelot-DelettreUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Vahid AsnafiINSERM U1151, Université de Paris, Institut Necker-Enfants Malades, Assistance Publique-Hopitaux de Paris, Paris, France.
Elizabeth MacintyreINSERM U1151, Université de Paris, Institut Necker-Enfants Malades, Assistance Publique-Hopitaux de Paris, Paris, France.
Sandrine GeffroyUniversité Lille, Centre National de la Recherche Scientifique, INSERM, CHU Lille, UMR9020-U1277, Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France.
Mary CallananService d'Oncologie Génétique, Université Bourgogne-Franche Comté, INSERM 1231 and 1209, CHU Dijon Bourgogne, Dijon, France.
Tony PetrellaDepartment of Pathology, University of Montréal, Hôpital Maisonneuve-Rosemont, Montréal, QC, Canada.
Eric DeconinckUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Etienne DaguindauUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Véronique HarrivelLaboratoire d'Hématologie, CHU Hôpital Nord, Place Victor Pauchet, Amiens, France.
Sabrina BouyerService d'Hématologie Biologique, CHU La Milétrie, Poitiers, France.
Véronique SalaunLaboratoire d'Hématologie, CHU de Caen Normandie, Normandie Université, UNICAEN, Caen, France.
Pascale SaussoyService de Biologie Hématologique, Cliniques Universitaires St-Luc, Brussels, Belgium.
Jean FeuillardLaboratoire d'Hématologie, CHU Dupuytren, Limoges, France; and.
Pascal FuseauLaboratoire d'Hématologie, Site P. Zobda Quitman, CHU de Martinique, Fort-de-France, Martinique, France.
Philippe SaasUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Olivier AdotéviUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Fabrice JardinInstitut Régional du Cancer Montpellier, Montpellier, France.
Christophe FerrandUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Claude PreudhommeUniversité Lille, Centre National de la Recherche Scientifique, INSERM, CHU Lille, UMR9020-U1277, Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France.
Jacques ColingeUniversité de Montpellier, INSERM, Institut Régional du Cancer de Montpellier, U1194, Institut de Recherche en Cancérologie de Montpellier, Montpellier, France.
Christophe RoumierUniversité Lille, Centre National de la Recherche Scientifique, INSERM, CHU Lille, UMR9020-U1277, Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, France.
Francine Garnache-OttouUniversité Bourgogne Franche-Comté, INSERM, Établissement Français du Sang Bourgogne/Franche-Comté, UMR1098, RIGHT (Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaire et Génique), Besançon, France.
Inserm · FRCentre Hospitalier Universitaire de Martinique · MQCliniques Universitaires Saint-Luc · BEÉtablissement Français du Sang · FRHôpital Dupuytren · FRHôpital Maisonneuve-Rosemont · CAHôpital Nord · FRInstitut de Recherche en Cancérologie de Montpellier · FRLaboratoire de Génétique Cellulaire · FRNormandie Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oncogenesis and ontogeny of blastic plasmacytoid dendritic cell neoplasm (BPDCN) remain uncertain, between canonical plasmacytoid dendritic cells (pDCs) and AXL+ SIGLEC6+ DCs (AS-DCs). We compared 12 BPDCN to 164 acute leukemia by Affymetrix HG-U133 Plus 2.0 arrays: BPDCN were closer to B-cell acute lymphoblastic leukemia (ALL), with enrichment in pDC, B-cell signatures, vesicular transport, deubiquitination pathways, and AS-DC signatures, but only in some cases. Importantly, 1 T-cell ALL clustered with BPDCN, with compatible morphology, immunophenotype (cCD3+ sCD3- CD123+ cTCL1+ CD304+), and genetics. Many oncogenetic pathways are deregulated in BPDCN compared with normal pDC, such as cell-cycle kinases, and importantly, the transcription factor SOX4, involved in B ontogeny, pDC ontogeny, and cancer cell invasion. High-throughput sequencing (HaloPlex) showed myeloid mutations (TET2, 62%; ASXL1, 46%; ZRSR2, 31%) associated with lymphoid mutations (IKZF1), whereas single-nucleotide polymorphism (SNP) array (Affymetrix SNP array 6.0) revealed frequent losses (mean: 9 per patient) involving key hematological oncogenes (RB1, IKZF1/2/3, ETV6, NR3C1, CDKN2A/B, TP53) and immune response genes (IFNGR, TGFB, CLEC4C, IFNA cluster). Various markers suggest an AS-DC origin, but not in all patients, and some of these abnormalities are related to the leukemogenesis process, such as the 9p deletion, leading to decreased expression of genes encoding type I interferons. In addition, the AS-DC profile is only found in a subgroup of patients. Overall, the cellular ontogenic origin of BPDCN remains to be characterized, and these results highlight the heterogeneity of BPDCN, with a risk of a diagnostic trap.

Indexed as

Myeloproliferative DisordersTranscriptomeCarcinogenesisDendritic CellsGenomicsHumansLectins, C-TypeMembrane GlycoproteinsReceptors, ImmunologicSOXC Transcription FactorsCLEC4C protein, humanLectins, C-TypeMembrane GlycoproteinsReceptors, ImmunologicSOX4 protein, humanSOXC Transcription Factors

Identifiers

PMID33687433
PMCPMC7948279
OpenAlexW3133912993

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.