Evidence map›Paper›PMID 33686153›Full record

ArticleScientific reports2021

Identification of suitable reference genes for mesenchymal stem cells from menstrual blood of women with endometriosis.

Victoria S Zucherato, Leticia B C Penariol, Lilian E C M Silva, Cristiana C Padovan, Omero B Poli-Neto, Julio C Rosa-E-Silva, Rui A Ferriani, Juliana Meola

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Victoria S ZucheratoGynecology and Obstetrics Department, Ribeirao Preto Medical School, University of Sao Paulo, Bandeirantes Avenue, 3900, 8th Floor of the Clinic Hospital, Universitary Campus, Ribeirao Preto, SP, 14049-900, Brazil.
Leticia B C PenariolGynecology and Obstetrics Department, Ribeirao Preto Medical School, University of Sao Paulo, Bandeirantes Avenue, 3900, 8th Floor of the Clinic Hospital, Universitary Campus, Ribeirao Preto, SP, 14049-900, Brazil.
Lilian E C M SilvaMultiuser Laboratory, Ribeirao Preto Medical School, University of Sao Paulo, Ribeirao Preto, SP, Brazil.
Cristiana C PadovanGynecology and Obstetrics Department, Ribeirao Preto Medical School, University of Sao Paulo, Bandeirantes Avenue, 3900, 8th Floor of the Clinic Hospital, Universitary Campus, Ribeirao Preto, SP, 14049-900, Brazil.
Omero B Poli-NetoGynecology and Obstetrics Department, Ribeirao Preto Medical School, University of Sao Paulo, Bandeirantes Avenue, 3900, 8th Floor of the Clinic Hospital, Universitary Campus, Ribeirao Preto, SP, 14049-900, Brazil.
Julio C Rosa-E-SilvaGynecology and Obstetrics Department, Ribeirao Preto Medical School, University of Sao Paulo, Bandeirantes Avenue, 3900, 8th Floor of the Clinic Hospital, Universitary Campus, Ribeirao Preto, SP, 14049-900, Brazil.
Rui A FerrianiGynecology and Obstetrics Department, Ribeirao Preto Medical School, University of Sao Paulo, Bandeirantes Avenue, 3900, 8th Floor of the Clinic Hospital, Universitary Campus, Ribeirao Preto, SP, 14049-900, Brazil.
Juliana MeolaGynecology and Obstetrics Department, Ribeirao Preto Medical School, University of Sao Paulo, Bandeirantes Avenue, 3900, 8th Floor of the Clinic Hospital, Universitary Campus, Ribeirao Preto, SP, 14049-900, Brazil. jumeola@yahoo.com.br.
Universidade de São Paulo · BRNational Council for Scientific and Technological Development · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It has been suggested that menstrual blood-derived mesenchymal stem/stromal cells (MenMSCs) are associated with the etiopathogenesis of endometriosis and considerable effort has been invested in searching for target genes and deciphering associated molecular pathways. However, reference gene stability for proper reproducible normalization in the analyses of the expression data validation is still unexplored in this experimental context. Therefore, in this exploratory study, we used stringent case and control selection criteria and collected menstrual blood from women with a laparoscopic diagnosis of advanced endometriosis and from fertile women without endometriosis. We tested for the first time the stability of 32 candidate reference genes to achieve increased accuracy and reliable results in the quantification of gene expression and direct future experiments using reverse transcription-quantitative PCR (RT-qPCR) in MenMSCs for endometriosis studies. Using the RefFinder web tool, we recommend the EIF2B1 and POP4 reference genes for the normalization of RT-qPCR data in study designs similar to ours. Furthermore, we suggest avoiding the commonly used GAPDH and ACTB reference genes as they are unstable. This high-visibility study is capable of directing different experimental designs as MenMSCs are derived from a minimally invasive tissue source with multifunctional roles in regenerative medicine.

Indexed as

EndometriosisMenstruationAdolescentAdultFemaleGene Expression ProfilingHumansMesenchymal Stem CellsReal-Time Polymerase Chain ReactionReference Standards

Identifiers

PMID33686153
PMCPMC7970877
OpenAlexW3135806375

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.