Evidence map›Paper›PMID 33686110›Full record

ArticleScientific reports2021

Identification, classification, and characterization of AP2/ERF superfamily genes in Masson pine (Pinus massoniana Lamb.).

Peihuang Zhu, Yu Chen, Jinfeng Zhang, Fan Wu, Xiaofeng Wang, Ting Pan, Qiang Wei, Yanping Hao, Xuelian Chen, Chunwu Jiang and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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  7. International journal of molecular sciences · 2024
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  12. Genome-wide identification and expression analysis of the ALDH gene family and functional analysis ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Peihuang ZhuKey Laboratory of Forestry Genetics & Biotechnology of Ministry of Education, Nanjing, 210037, China.
Yu ChenKey Laboratory of Forestry Genetics & Biotechnology of Ministry of Education, Nanjing, 210037, China.
Jinfeng ZhangKey Laboratory of Forestry Genetics & Biotechnology of Ministry of Education, Nanjing, 210037, China.
Fan WuKey Laboratory of Forestry Genetics & Biotechnology of Ministry of Education, Nanjing, 210037, China.
Xiaofeng WangKey Laboratory of Forestry Genetics & Biotechnology of Ministry of Education, Nanjing, 210037, China.
Ting PanAnhui Academy of Forestry, Hefei, 230031, China.
Qiang WeiAnhui Academy of Forestry, Hefei, 230031, China.
Yanping HaoAnhui Academy of Forestry, Hefei, 230031, China.
Xuelian ChenAnhui Academy of Forestry, Hefei, 230031, China.
Chunwu JiangAnhui Academy of Forestry, Hefei, 230031, China.
Kongshu JiKey Laboratory of Forestry Genetics & Biotechnology of Ministry of Education, Nanjing, 210037, China. ksji@njfu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription factors (TFs) play crucial regulatory roles in controlling the expression of the target genes in plants. APETALA2/Ethylene-responsive factors (AP2/ERF) are part of a large superfamily of plant-specific TFs whose members are involved in the control of plant metabolism, development and responses to various biotic and abiotic stresses. However, the AP2/ERF superfamily has not been identified systematically in Masson pine (Pinus massoniana), which is one of the most important conifer in southern China. Therefore, we performed systematic identification of the AP2/ERF superfamily using transcriptome sequencing data from Masson pine. In the current study, we obtained 88 members of the AP2/ERF superfamily. All PmAP2/ERF members could be classified into 3 main families, AP2 (7 members), RAV (7 members), ERF (73 members) families, and a soloist protein. Subcellular localization assays suggested that two members of PmAP2/ERF were nuclear proteins. Based on pine wood nematode (PWN) inoculated transcriptome and qPCR analysis, we found that many members of PmAP2/ERF could respond to PWN inoculation and PWN related treatment conditions in vitro. In general, members of the AP2/ERF superfamily play an important role in the response of Masson pine responds to PWN. Furthermore, the roles of the AP2/ERF superfamily in other physiological activities of Masson pine remain to be further studied.

Indexed as

Evolution, MolecularGene Expression Regulation, PlantMultigene FamilyPinusPlant ProteinsTranscription Factor AP-2PhylogenyPlant ProteinsTranscription Factor AP-2

Identifiers

PMID33686110
PMCPMC7940494

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