Evidence map›Paper›PMID 33684989›Full record

ArticleThe Korean journal of parasitology2021

Differentially Expressed Gene Profile of Acanthamoeba castellanii Induced by an Endosymbiont Legionella pneumophila.

Eun-Kyung Moon, So-Min Park, Ki-Back Chu, Fu-Shi Quan, Hyun-Hee Kong

Open access · diamondAbstract read
In one paragraph

Article in The Korean journal of parasitology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Eun-Kyung MoonDepartment of Medical Zoology, Kyung Hee University School of Medicine, Seoul 02447, Korea.
So-Min ParkDepartment of Biomedical Science, Graduate School, Kyung Hee University, Seoul 02447, Korea.
Ki-Back ChuDepartment of Biomedical Science, Graduate School, Kyung Hee University, Seoul 02447, Korea.
Fu-Shi QuanDepartment of Medical Zoology, Kyung Hee University School of Medicine, Seoul 02447, Korea.
Hyun-Hee KongDepartment of Parasitology, Dong-A University College of Medicine, Busan 49201, Korea.
Kyung Hee University · KRKyung Hee University Medical Center · KRDong-A University · KR

Funding

Ministry of Science and ICTNational Research Foundation of Korea 2020R1F1A1068719
6 · The paper itself

Abstract

Legionella pneumophila is an opportunistic pathogen that survives and proliferates within protists such as Acanthamoeba spp. in environment. However, intracellular pathogenic endosymbiosis and its implications within Acanthamoeba spp. remain poorly understood. In this study, RNA sequencing analysis was used to investigate transcriptional changes in A. castellanii in response to L. pneumophila infection. Based on RNA sequencing data, we identified 1,211 upregulated genes and 1,131 downregulated genes in A. castellanii infected with L. pneumophila for 12 hr. After 24 hr, 1,321 upregulated genes and 1,379 downregulated genes were identified. Gene ontology (GO) analysis revealed that L. pneumophila endosymbiosis enhanced hydrolase activity, catalytic activity, and DNA binding while reducing oxidoreductase activity in the molecular function (MF) domain. In particular, multiple genes associated with the GO term 'integral component of membrane' were downregulated during endosymbiosis. The endosymbiont also induced differential expression of various methyltransferases and acetyltransferases in A. castellanii. Findings herein are may significantly contribute to understanding endosymbiosis of L. pneumophila within A. castellanii.

Indexed as

Acanthamoeba castellaniiAcetyltransferasesCatalysisGene OntologyGenes, ProtozoanHydrolasesLegionella pneumophilaMethyltransferasesOxidoreductasesSequence Analysis, RNASymbiosisTranscription, GeneticTranscriptomeAcetyltransferasesHydrolasesMethyltransferasesOxidoreductasesAcanthamoebadifferential gene expressionendosymbiosisLegionella

Identifiers

PMID33684989
PMCPMC7939966
OpenAlexW3132780031

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.