Evidence map›Paper›PMID 33683819›Full record

ArticleAngewandte Chemie (International ed. in English)2021

Magnetization Transfer to Enhance NOE Cross-Peaks among Labile Protons: Applications to Imino-Imino Sequential Walks in SARS-CoV-2-Derived RNAs.

Mihajlo Novakovic, Ēriks Kupče, Tali Scherf, Andreas Oxenfarth, Robbin Schnieders, J Tassilo Grün, Julia Wirmer-Bartoschek, Christian Richter, Harald Schwalbe, Lucio Frydman

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Identifying and Overcoming Artifacts inJournal of the American Chemical Society · 2023
    Article
  5. The Extended Hadamard Transform: Sensitivity-Enhanced NMR Experiments Among Labile and Non-LabileChemphyschem : a European journal of chemical physics and physical chemistry · 2022
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mihajlo NovakovicDepartment of Chemical and Biological Physics, Weizmann Institute of Science, 7610001, Rehovot, Israel.
Ēriks KupčeBruker (UK) Ltd., Banner Lane, Coventry, UK.
Tali ScherfDepartment of Chemical and Biological Physics, Weizmann Institute of Science, 7610001, Rehovot, Israel.
Andreas OxenfarthInstitute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance, Johann Wolfgang Goethe-University, 60438, Frankfurt/Main, Germany.
Robbin SchniedersInstitute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance, Johann Wolfgang Goethe-University, 60438, Frankfurt/Main, Germany.
J Tassilo GrünInstitute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance, Johann Wolfgang Goethe-University, 60438, Frankfurt/Main, Germany.
Julia Wirmer-BartoschekInstitute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance, Johann Wolfgang Goethe-University, 60438, Frankfurt/Main, Germany.
Christian RichterInstitute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance, Johann Wolfgang Goethe-University, 60438, Frankfurt/Main, Germany.
Harald SchwalbeInstitute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance, Johann Wolfgang Goethe-University, 60438, Frankfurt/Main, Germany.
Lucio FrydmanDepartment of Chemical and Biological Physics, Weizmann Institute of Science, 7610001, Rehovot, Israel.ORCID 0000-0001-8208-3521

Funding

DFG 902German-Israeli Foundation for Scientific Research and Development G-1501-302H2020 Future and Emerging Technologies 828946Israel Science Foundation 3572/20Israel Science Foundation 965/18
6 · The paper itself

Abstract

2D NOESY plays a central role in structural NMR spectroscopy. We have recently discussed methods that rely on solvent-driven exchanges to enhance NOE correlations between exchangeable and non-exchangeable protons in nucleic acids. Such methods, however, fail when trying to establish connectivities within pools of labile protons. This study introduces an alternative that also enhances NOEs between such labile sites, based on encoding a priori selected peaks by selective saturations. The resulting selective magnetization transfer (SMT) experiment proves particularly useful for enhancing the imino-imino cross-peaks in RNAs, which is a first step in the NMR resolution of these structures. The origins of these enhancements are discussed, and their potential is demonstrated on RNA fragments derived from the genome of SARS-CoV-2, recorded with better sensitivity and an order of magnitude faster than conventional 2D counterparts.

Indexed as

ProtonsMagnetic PhenomenaNuclear Magnetic Resonance, BiomolecularRNA, ViralSARS-CoV-2ProtonsRNA, Viral2D NMR spectroscopyCESTNOESYRNASARS-CoV-2

Identifiers

PMID33683819
PMCPMC8251384

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.