Evidence map›Paper›PMID 33683458›Full record

ArticleThe European physical journal. E, Soft matter2021

First passage time in post-transcriptional regulation by multiple small RNAs.

Kuheli Biswas, Anandamohan Ghosh

Abstract read
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In one paragraph

Article in The European physical journal. E, Soft matter, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Kuheli BiswasIndian Institute of Science Education and Research Kolkata, Mohanpur, Nadia, 741246, India.
Anandamohan GhoshIndian Institute of Science Education and Research Kolkata, Mohanpur, Nadia, 741246, India. anandamohan@iiserkol.ac.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The post-transcriptional regulation of a protein by multiple small RNA molecules has been formulated as a stochastic process. An approximate solution of the master equation shows that the protein statistics can exhibit a generic form applicable for many regulatory scenarios. The first passage time (FPT) statistics has been obtained for regulation by single sRNA, with negative and positive regulations as limiting cases, as well as regulation by multiple sRNAs. The multiple sRNAs are able to independently control protein mean and variance, and we show that this is an advantageous mechanism to control FPT fluctuations in order to improve timing efficiency in post-transcriptional regulation.

Indexed as

Computer SimulationGene Expression Regulation, BacterialModels, GeneticModels, StatisticalProteinsRNA, Small UntranslatedStochastic ProcessesTime FactorsTranscriptional ActivationProteinsRNA, Small Untranslated

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.