Evidence map›Paper›PMID 33683363›Full record

ArticleGenetics2021

Genetic contribution to high temperature tolerance in Cryptococcus neoformans.

Piotr R Stempinski, Jessica M Zielinski, Nadir H Dbouk, Elizabeth S Huey, Ellen C McCormack, Alexander M Rubin, Srikripa Chandrasekaran, Lukasz Kozubowski

Abstract read
In one paragraph

Article in Genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Study of the temperature-related factors that activate the NLRP3 inflammasome inFrontiers in cellular and infection microbiology · 2026
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Comparative genomics ofbioRxiv : the preprint server for biology · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Piotr R StempinskiDepartment of Genetics & Biochemistry, Eukaryotic Pathogens Innovation Center (EPIC), Clemson University, Clemson, SC 29634, USA.
Jessica M ZielinskiDepartment of Genetics & Biochemistry, Eukaryotic Pathogens Innovation Center (EPIC), Clemson University, Clemson, SC 29634, USA.
Nadir H DboukDepartment of Biology, Furman University, Greenville, SC 29613, USA.
Elizabeth S HueyDepartment of Genetics & Biochemistry, Eukaryotic Pathogens Innovation Center (EPIC), Clemson University, Clemson, SC 29634, USA.
Ellen C McCormackDepartment of Genetics & Biochemistry, Eukaryotic Pathogens Innovation Center (EPIC), Clemson University, Clemson, SC 29634, USA.
Alexander M RubinDepartment of Genetics & Biochemistry, Eukaryotic Pathogens Innovation Center (EPIC), Clemson University, Clemson, SC 29634, USA.
Srikripa ChandrasekaranDepartment of Biology, Furman University, Greenville, SC 29613, USA.
Lukasz KozubowskiDepartment of Genetics & Biochemistry, Eukaryotic Pathogens Innovation Center (EPIC), Clemson University, Clemson, SC 29634, USA.

Funding

Rapid production of SARS-CoV-2 molecular clones using CRISPR-based yeast recombineeringR01AI100272 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MADHANI, HITEN D · 2012 to 2025
$11.3M
The role of acetate fermentation in Entamoeba histolytica growth and infectionP20GM109094 · NIGMS · CLEMSON UNIVERSITY · PI KOZUBOWSKI, LUKASZ · 2016 to 2020
$10.4M
NIAID NIH HHS R01 AI100272NIGMS NIH HHS P20 GM109094
6 · The paper itself

Abstract

The human fungal pathogen Cryptococcus neoformans relies on a complex signaling network for the adaptation and survival at the host temperature. Protein phosphatase calcineurin is central to proliferation at 37°C but its exact contributions remain ill-defined. To better define genetic contributions to the C. neoformans temperature tolerance, 4031 gene knockouts were screened for genes essential at 37°C and under conditions that keep calcineurin inactive. Identified 83 candidate strains, potentially sensitive to 37°C, were subsequently subject to technologically simple yet robust assay, in which cells are exposed to a temperature gradient. This has resulted in identification of 46 genes contributing to the maximum temperature at which C. neoformans can proliferate (Tmax). The 46 mutants, characterized by a range of Tmax on drug-free media, were further assessed for Tmax under conditions that inhibit calcineurin, which led to identification of several previously uncharacterized knockouts exhibiting synthetic interaction with the inhibition of calcineurin. A mutant that lacked septin Cdc11 was among those with the lowest Tmax and failed to proliferate in the absence of calcineurin activity. To further define connections with calcineurin and the role for septins in high temperature growth, the 46 mutants were tested for cell morphology at 37°C and growth in the presence of agents disrupting cell wall and cell membrane. Mutants sensitive to calcineurin inhibition were tested for synthetic lethal interaction with deletion of the septin-encoding CDC12 and the localization of the septin Cdc3-mCherry. The analysis described here pointed to previously uncharacterized genes that were missed in standard growth assays indicating that the temperature gradient assay is a valuable complementary tool for elucidating the genetic basis of temperature range at which microorganisms proliferate.

Indexed as

CalcineurinCell MembraneCryptococcus neoformansFungal ProteinsMutationSeptinsThermotoleranceCalcineurinFungal ProteinsSeptinscalcineurinfungal pathogenesisseptinstemperature stressyeast

Identifiers

PMID33683363
PMCPMC8045695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.