Evidence map›Paper›PMID 33683204›Full record

ArticleeLife2021

SARS-CoV-2 suppresses anticoagulant and fibrinolytic gene expression in the lung.

Alan E Mast, Alisa S Wolberg, David Gailani, Michael R Garvin, Christiane Alvarez, J Izaak Miller, Bruce Aronow, Daniel Jacobson

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 4 pooled it
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 4 syntheses or guidelines pooled it, 64 citations in OpenAlex.

  1. Endotheliopathy in Acute COVID-19 and Long COVID.International journal of molecular sciences · 2023
    Pooled it
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  10. Lethal COVID-19 associates with RAAS-induced inflammation for multiple organ damage including mediastinal lymph nodes.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Article
  12. Article
  13. Tissue Factor and COVID-19 Associated Thrombosis.Arteriosclerosis, thrombosis, and vascular biology · 2024
    Article
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  15. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Alan E Mast *Versiti Blood Research Institute, Department of Cell Biology Neurobiology and Anatomy Medical College of Wisconsin, Milwaukee, United States.ORCID 0000-0003-3740-0318
Alisa S Wolberg *Department of Pathology and Laboratory Medicine and UNC Blood Research Center, Chapel Hill, United States.ORCID 0000-0002-2845-2303
David Gailani *Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, United States.
Michael R GarvinOak Ridge National Laboratory, Biosciences Division, Oak Ridge, United States.ORCID 0000-0002-2204-7569
Christiane AlvarezOak Ridge National Laboratory, Biosciences Division, Oak Ridge, United States.
J Izaak MillerOak Ridge National Laboratory, Biosciences Division, Oak Ridge, United States.
Bruce AronowUniversity of Tennessee Knoxville, The Bredesen Center for Interdisciplinary Research and Graduate Education, Knoxville, United States.
Daniel JacobsonOak Ridge National Laboratory, Biosciences Division, Oak Ridge, United States.ORCID 0000-0002-9822-8251
Oak Ridge National Laboratory · USCincinnati Children's Hospital Medical Center · USMedical College of Wisconsin · USUniversity of North Carolina Health Care · USVanderbilt University Medical Center · US

Funding

Stem Cell/Organoid and Genome Editing CoreP30DK078392 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Alexander Miethke · 2007 to 2026
$24.4M
The LungMAP Data Coordination Center for Next Gen Systems Biology of RespirationU24HL148865 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI Bruce J Aronow, Nathan G. Salomonis · 2019 to 2026
$12.4M
Tissue Factor Pathway Inhibitor Binding Proteins on EndoR01HL068835 · NHLBI · VERSITI WISCONSIN, INC. · PI Alan E Mast · 2002 to 2026
$9.7M
Biochemistry and Pathophysiology of Factor XI and Contact ActivationR35HL140025 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GAILANI, DAVID · 2018 to 2024
$5.5M
Fibrinogen and Factor XIII in Venous ThrombosisR01HL126974 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Alisa S. Wolberg · 2016 to 2026
$4.4M
Targeting the Plasminogen Activation System to Limit Pancreatic Cancer Progression and Associated ThrombosisU01HL143403 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI FISHEL, MELISSA L., FLICK, MATTHEW J. · 2018 to 2022
$4.2M
USING QUANTITATIVE TRAITS TO IDENTIFY NOVEL GENES FOR ALZHEIMERS DISEASE AND OTHER COMPLEX TRAITSRF1AG053303 · NIA · WASHINGTON UNIVERSITY · PI CLIMER, SHARLEE, CRUCHAGA, CARLOS · 2016 to 2020
$4.0M
NHLBI NIH HHS R01 HL068835NHLBI NIH HHS R01 HL126974NHLBI NIH HHS R35 HL140025NHLBI NIH HHS U01 HL143403NHLBI NIH HHS U24 HL148865NIA NIH HHS 3RF1AG053303-01S2NIA NIH HHS RF1 AG053303NIDDK NIH HHS P30 DK078392NIH HHS HL068835NIH HHS HL126974NIH HHS HL140025NIH HHS HL143403NIH HHS U24 HL148NIH HHS U24 HL148865
6 · The paper itself

Abstract

Extensive fibrin deposition in the lungs and altered levels of circulating blood coagulation proteins in COVID-19 patients imply local derangement of pathways that limit fibrin formation and/or promote its clearance. We examined transcriptional profiles of bronchoalveolar lavage fluid (BALF) samples to identify molecular mechanisms underlying these coagulopathies. mRNA levels for regulators of the kallikrein-kinin (C1-inhibitor), coagulation (thrombomodulin, endothelial protein C receptor), and fibrinolytic (urokinase and urokinase receptor) pathways were significantly reduced in COVID-19 patients. While transcripts for several coagulation proteins were increased, those encoding tissue factor, the protein that initiates coagulation and whose expression is frequently increased in inflammatory disorders, were not increased in BALF from COVID-19 patients. Our analysis implicates enhanced propagation of coagulation and decreased fibrinolysis as drivers of the coagulopathy in the lungs of COVID-19 patients.

Indexed as

SARS-CoV-2AnticoagulantsBlood CoagulationBronchoalveolar Lavage FluidCOVID-19Endothelial Protein C ReceptorFibrinGene ExpressionHumansKallikrein-Kinin SystemKallikreinsKininsLungRNA, MessengerSequence Analysis, RNAThrombomodulinAnticoagulantsEndothelial Protein C ReceptorFibrinKallikreinsKininsRNA, MessengerThrombomodulinUrokinase-Type Plasminogen ActivatorbronchoalvelolarcoagulationCOVID-19epidemiologyfibrinolysisglobal healthhumanmedicineSARS-CoV-2

Identifiers

PMID33683204
PMCPMC8049742
OpenAlexW3135197407

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.