Evidence map›Paper›PMID 33682888›Full record

ArticleBioscience reports2021

Interferon characterization associates with asthma and is a potential biomarker of predictive diagnosis.

Hairong Shu, Yong Li, Hangyu Xu, Qing Yin, Jianxin Song, Minqiao Zheng, He Li

RetractedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in Bioscience reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 98% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Hairong Shu *Department of Otolaryngology, Taizhou Central Hospital (Taizhou University Hospital), Taizhou, Zhejiang 318000, China.
Yong Li *Department of Otolaryngology, Taizhou Municipal Hospital, Medical College of Taizhou University, Taizhou, Zhejiang 318000, China.
Hangyu XuDepartment of Otolaryngology, Taizhou Central Hospital (Taizhou University Hospital), Taizhou, Zhejiang 318000, China.
Qing YinDepartment of Otolaryngology, Taizhou Central Hospital (Taizhou University Hospital), Taizhou, Zhejiang 318000, China.
Jianxin SongDepartment of Otolaryngology, Taizhou Central Hospital (Taizhou University Hospital), Taizhou, Zhejiang 318000, China.
Minqiao ZhengCentral Laboratory, The Affiliated Wenling Hospital, Wenzhou Medical University; #333, S Chuan'an Road, Wenling, Zhejiang 317500, China.
He LiDepartment of Otolaryngology, The First Affiliated Hospital of Wenzhou Medical University, Village ShangCai, Ouhai District, Wenzhou City, Zhejiang Province 325000, China.
Taizhou Central Hospital · CNWenzhou Medical University · CNTaizhou Municipal Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interferon (IFN) plays a role in immune and inflammation responses. However, the effect of IFN in asthma is still not fully clear. The present study was conducted to better understand the role of IFN signatures in asthma. Blood samples from case-control studies (study 1: 348 asthmas and 39 normal controls and validation study 2: 411 asthmas and 87 normal controls) were enrolled. The single-sample gene set enrichment analysis (ssGSEA) method was used to quantify the levels of 74 IFN signatures. Gene Ontology analysis and pathway function analysis were performed for functional analysis and a protein-protein interaction (PPI) network was constructed. The area under the curve (AUC) value was used to evaluate the diagnostic ability. In our work, IFN-γ response-DN, negative regulation of IFN-γ secretion, IFNG pathway, negative regulation of response to IFN-γ, and type 1 IFN biosynthetic process showed higher levels in asthma. Functional analysis demonstrated that pathway and biological process involved in IFN signaling pathway, regulation of type 1 IFN production and response to IFN-γ. Hub IFN-related genes were identified, and their combination as biomarker exhibited a good diagnostic capacity for asthma (AUC = 0.832). These findings offered more insight into the underlying mechanism of how IFN signatures affected asthma. The use of the easy-to-apply IFN-related genes might serve as a promising blood-based biomarker for early diagnosis of asthma.

Indexed as

asthmabiomarkerblooddiagnosisIFN

Identifiers

PMID33682888
PMCPMC7982770
OpenAlexW3133733823

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.