Evidence map›Paper›PMID 33682374›Full record

ArticleProteomics. Clinical applications2021

Pilot proteomic analysis of cerebrospinal fluid in Alzheimer's disease.

Justin McKetney, Daniel J Panyard, Sterling C Johnson, Cynthia M Carlsson, Corinne D Engelman, Joshua J Coon

Abstract read
In one paragraph

Article in Proteomics. Clinical applications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Justin McKetneyDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.ORCID 0000-0002-2405-8288
Daniel J PanyardDepartment of Population Health Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Sterling C JohnsonGeriatric Research Education and Clinical Center, Middleton Memorial Veterans Hospital, Madison, Wisconsin, USA.
Cynthia M CarlssonGeriatric Research Education and Clinical Center, Middleton Memorial Veterans Hospital, Madison, Wisconsin, USA.
Corinne D EngelmanDepartment of Population Health Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Joshua J CoonDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.ORCID 0000-0002-0004-8253

Funding

Wisconsin Alzheimer's Disease Research CenterP30AG062715 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI Barbara Brigitta Bendlin · 2019 to 2026
$34.5M
TR&D 2 Metabolic Labels for Ultraplexed Protein Quantification p. 453P41GM108538 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COON, JOSHUA J · 2016 to 2025
$13.1M
Genomic and Metabolomic Data Integration in a Longitudinal Cohort at Risk for Alzheimer's DiseaseR01AG054047 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI ENGELMAN, CORINNE D. · 2016 to 2020
$3.6M
NIA NIH HHS P30 AG062715NIA NIH HHS R01 AG054047NIGMS NIH HHS P41 GM108538
6 · The paper itself

Abstract

Proteomic analysis of cerebrospinal fluid (CSF) holds great promise in understanding the progression of neurodegenerative diseases, including Alzheimer's disease (AD). As one of the primary reservoirs of neuronal biomolecules, CSF provides a window into the biochemical and cellular aspects of the neurological environment. CSF can be drawn from living participants allowing the potential alignment of clinical changes with these biochemical markers. Using cutting-edge mass spectrometry technologies, we perform a streamlined proteomic analysis of CSF. We quantify greater than 700 proteins across 10 pairs of age- and sex-matched participants in approximately one hour of analysis time each. Using the paired participant study structure, we identify a small group of biologically relevant proteins that show substantial changes in abundance between cognitive normal and AD participants, which were then analyzed at the peptide level using parallel reaction monitoring experiments. Our findings suggest the utility of fractionating a single sample and using matching to increase proteomic depth in cerebrospinal fluid, as well as the potential power of an expanded study.

Indexed as

Alzheimer DiseaseProteomicsAgedAged, 80 and overBiomarkersCerebrospinal Fluid ProteinsFemaleHumansMaleMiddle AgedPilot ProjectsBiomarkersCerebrospinal Fluid ProteinsAlzheimer's diseasecerebrospinal fluidFAIMSneurodegeneration

Identifiers

PMID33682374
PMCPMC8197734

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.