Evidence map›Paper›PMID 33682368›Full record

ArticleCancer medicine2021

Micro-morphological feature visualization, auto-classification, and evolution quantitative analysis of tumors by using SR-PCT.

Gong-Xiang Wei, Yun-Yan Liu, Xue-Wen Ji, Qiao-Xin Li, Yan Xing, Yan-Ling Xue, Hui-Qiang Liu

Abstract read
In one paragraph

Article in Cancer medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Gong-Xiang WeiSchool of Physics and Optoelectronic Engineering, Shandong University of Technology, Zibo, China.
Yun-Yan LiuSchool of Physics and Optoelectronic Engineering, Shandong University of Technology, Zibo, China.
Xue-Wen JiState Key Laboratory of Pathogenesis, Prevention, Treatment of Central Asian High Incidence Diseases, First Affiliated Hospital of Xinjiang Medical University, Urumqi, China.
Qiao-Xin LiState Key Laboratory of Pathogenesis, Prevention, Treatment of Central Asian High Incidence Diseases, First Affiliated Hospital of Xinjiang Medical University, Urumqi, China.
Yan XingState Key Laboratory of Pathogenesis, Prevention, Treatment of Central Asian High Incidence Diseases, First Affiliated Hospital of Xinjiang Medical University, Urumqi, China.
Yan-Ling XueSSRF, Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, China.
Hui-Qiang LiuSchool of Physics and Optoelectronic Engineering, Shandong University of Technology, Zibo, China.ORCID 0000-0002-9999-584X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tissue micro-morphological abnormalities and interrelated quantitative data can provide immediate evidences for tumorigenesis and metastasis in microenvironment. However, the multiscale three-dimensional nondestructive pathological visualization, measurement, and quantitative analysis are still a challenging for the medical imaging and diagnosis. In this work, we employed the synchrotron-based X-ray phase-contrast tomography (SR-PCT) combined with phase-and-attenuation duality phase retrieval to reconstruct and extract the volumetric inner-structural characteristics of tumors in digesting system, helpful for tumor typing and statistic calculation of different tumor specimens. On the basis of the feature set including eight types of tumor micro-lesions presented by our SR-PCT reconstruction with high density resolution, the AlexNet-based deep convolutional neural network model was trained and obtained the 94.21% of average accuracy of auto-classification for the eight types of tumors in digesting system. The micro-pathomophological relationship of liver tumor angiogenesis and progression were revealed by quantitatively analyzing the microscopic changes of texture and grayscale features screened by a machine learning method of area under curve and principal component analysis. The results showed the specific path and clinical manifestations of tumor evolution and indicated that these progressions of tumor lesions rely on its inflammation microenvironment. Hence, this high phase-contrast 3D pathological characteristics and automatic analysis methods exhibited excellent recognizable and classifiable for micro tumor lesions.

Indexed as

Neural Networks, ComputerSynchrotronsArea Under CurveHumansIntestinal NeoplasmsLiverLiver NeoplasmsMachine LearningMicrovesselsNeovascularization, PathologicPrincipal Component AnalysisSpecimen HandlingStomach NeoplasmsTomography, X-Ray ComputedTumor MicroenvironmentX-Ray Microtomographyangiogenesisliver cancermicroenvironmentpathology

Identifiers

PMID33682368
PMCPMC7982622

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.