Evidence map›Paper›PMID 33682149›Full record

ArticleAlcoholism, clinical and experimental research2021

Transcriptomic changes due to early, chronic intermittent alcohol exposure during forebrain development implicate WNT signaling, cell-type specification, and cortical regionalization as primary determinants of fetal alcohol syndrome.

Máté Fischer, Praveen Chander, Huining Kang, Nikolaos Mellios, Jason P Weick

Open access · greenAbstract read
In one paragraph

Article in Alcoholism, clinical and experimental research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 14 citations in OpenAlex.

  1. Impact of Prenatal Alcohol Exposure on Cerebral Cortex Development.Advances in experimental medicine and biology · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Máté FischerDepartment of Neurosciences, University of New Mexico HSC, Albuquerque, NM, USA.ORCID 0000-0002-6970-5039
Praveen ChanderDepartment of Neurosciences, University of New Mexico HSC, Albuquerque, NM, USA.
Huining KangDepartment of Internal Medicine, University of New Mexico HSC, Albuquerque, NM, USA.ORCID 0000-0002-4415-3573
Nikolaos MelliosDepartment of Neurosciences, University of New Mexico HSC, Albuquerque, NM, USA.
Jason P WeickDepartment of Neurosciences, University of New Mexico HSC, Albuquerque, NM, USA.
University of New Mexico · US

Funding

WOMEN'S CANCERS RESEARCH PROGRAMP30CA118100 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Yolanda Sanchez · 2005 to 2026
$57.1M
Unfolded Protein Response and Autophagy in T Helper Cell Effector FunctionP20GM121176 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Monica Rosas Lemus · 2017 to 2026
$24.9M
University of New Mexico (UNM) Center for Brain Recovery and RepairP20GM109089 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI SHUTTLEWORTH, CLAUDE W · 2015 to 2024
$22.7M
Understanding neurophysiological deficits in response inhibition in children with FASDP50AA022534 · NIAAA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Carlos Fernando Valenzuela · 2014 to 2026
$21.5M
Alcohol Research Training in NeurosciencesT32AA014127 · NIAAA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Jonathan L Brigman · 2003 to 2026
$3.3M
Molecular mechanisms of excitatory postsynaptic diversityR01NS116051 · NINDS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI WEICK, JASON P · 2021 to 2025
$1.8M
Sex-dependent effects of prenatal alcohol exposure on developmental programmingR01AA026583 · NIAAA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI MELLIOS, NIKOLAOS · 2019 to 2023
$1.7M
Light-based regulation of autophagy processing to target pathological forms of tauR21NS093442 · NINDS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI BHASKAR, KIRAN, WEICK, JASON P · 2016 to 2017
$417k
NCI NIH HHS P30 CA118100NIAAA NIH HHS P50 AA022534NIAAA NIH HHS R01 AA026583NIAAA NIH HHS T32 AA014127NIGMS NIH HHS 1P20GM109089-01NIGMS NIH HHS 1P20GM121176-01NIGMS NIH HHS P20 GM109089NIGMS NIH HHS P20 GM121176NINDS NIH HHS 1R01NS116051NINDS NIH HHS NS093442-01NINDS NIH HHS R01 NS116051NINDS NIH HHS R21 NS093442
6 · The paper itself

Abstract

backgroundFetal alcohol syndrome (FAS) due to gestational alcohol exposure represents one of the most common causes of nonheritable lifelong disability worldwide. In vitro and in vivo models have successfully recapitulated multiple facets of the disorder, including morphological and behavioral deficits, but far less is understood regarding the molecular and genetic mechanisms underlying FAS.

methodsIn this study, we utilized an in vitro human pluripotent stem cell-based (hPSC) model of corticogenesis to probe the effects of early, chronic intermittent alcohol exposure on the transcriptome of first trimester-equivalent cortical neurons.

resultsWe used RNA sequencing of developing hPSC-derived neurons treated for 50 days with 50 mM ethanol and identified a relatively small number of biological pathways significantly altered by alcohol exposure. These included cell-type specification, axon guidance, synaptic function, and regional patterning, with a notable upregulation of WNT signaling-associated transcripts observed in alcohol-exposed cultures relative to alcohol-naïve controls. Importantly, this effect paralleled a shift in gene expression of transcripts associated with regional patterning, such that caudal forebrain-related transcripts were upregulated at the expense of more anterior ones. Results from H9 embryonic stem cells were largely replicated in an induced pluripotent stem cell line (IMR90-4), indicating that these patterning alterations are not cell line-specific.

conclusionsWe found that a major effect of chronic intermittent alcohol on the developing cerebral cortex is an overall imbalance in regionalization, with enrichment of gene expression related to the production of posterodorsal progenitors and a diminution of anteroventral progenitors. This finding parallels behavioral and morphological phenotypes observed in animal models of high-dose prenatal alcohol exposure, as well as patients with FAS.

Indexed as

Axon GuidanceCell DifferentiationCentral Nervous System DepressantsCerebral CortexEthanolFetal Alcohol Spectrum DisordersGene ExpressionHumansIn Vitro TechniquesNeuronsPatch-Clamp TechniquesPluripotent Stem CellsProsencephalonRNA-SeqTranscriptomeWnt Signaling PathwayCentral Nervous System DepressantsEthanolarealizationFASH9IMR90-4patterning

Identifiers

PMID33682149
PMCPMC8643076
OpenAlexW3133834645

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.