Evidence map›Paper›PMID 33680070›Full record

ArticleComputational and mathematical methods in medicine2021

Integrated Learning: Screening Optimal Biomarkers for Identifying Preeclampsia in Placental mRNA Samples.

Rong Guo, Zhixia Teng, Yiding Wang, Xin Zhou, Heze Xu, Dan Liu

Abstract read
In one paragraph

Article in Computational and mathematical methods in medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rong GuoInformation and Computer Engineering College, Northeast Forestry University, Harbin 150040, China.ORCID https://orcid.org/0000-0003-0686-6991
Zhixia TengInformation and Computer Engineering College, Northeast Forestry University, Harbin 150040, China.ORCID https://orcid.org/0000-0002-6968-4354
Yiding WangInformation and Computer Engineering College, Northeast Forestry University, Harbin 150040, China.
Xin ZhouInformation and Computer Engineering College, Northeast Forestry University, Harbin 150040, China.
Heze XuDepartment of Gynecology and Obstetrics, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
Dan LiuInformation and Computer Engineering College, Northeast Forestry University, Harbin 150040, China.ORCID https://orcid.org/0000-0003-2624-5500

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Preeclampsia (PE) is a maternal disease that causes maternal and child death. Treatment and preventive measures are not sound enough. The problem of PE screening has attracted much attention. The purpose of this study is to screen placental mRNA to obtain the best PE biomarkers for identifying patients with PE. We use Limma in the R language to screen out the 48 differentially expressed genes with the largest differences and used correlation-based feature selection algorithms to reduce the dimensionality and avoid attribute redundancy arising from too many mRNA samples participating in the classification. After reducing the mRNA attributes, the mRNA samples are sorted from large to small according to information gain. In this study, a classifier model is designed to identify whether samples had PE through mRNA in the placenta. To improve the accuracy of classification and avoid overfitting, three classifiers, including C4.5, AdaBoost, and multilayer perceptron, are used. We use the majority voting strategy integrated with the differentially expressed genes and the genes filtered by the best subset method as comparison methods to train the classifier. The results show that the classification accuracy rate has increased from 79% to 82.2%, and the number of mRNA features has decreased from 48 to 13. This study provides clues for the main PE biomarkers of mRNA in the placenta and provides ideas for the treatment and screening of PE.

Indexed as

Machine LearningAlgorithmsBiomarkersComputational BiologyDatabases, Nucleic AcidDecision TreesDiagnosis, Computer-AssistedFemaleGenetic MarkersGenetic TestingHumansNeural Networks, ComputerPlacentaPre-EclampsiaPregnancyRNA, MessengerBiomarkersGenetic MarkersRNA, Messenger

Identifiers

PMID33680070
PMCPMC7925050

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.