Evidence map›Paper›PMID 33678177›Full record

ArticlePlant methods2021

New methods for confocal imaging of infection threads in crop and model legumes.

Angus E Rae, Vivien Rolland, Rosemary G White, Ulrike Mathesius

Open access · goldAbstract read
In one paragraph

Article in Plant methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Angus E RaeDepartment of Plant Sciences, Research School of Biology, Australian National University, Acton, ACT, 2601, Australia. angus.rae@anu.edu.au.ORCID http://orcid.org/0000-0001-8235-3907
Vivien RollandCSIRO Agriculture and Food, GPO Box 1700, Acton, ACT, 2601, Australia.
Rosemary G WhiteDepartment of Plant Sciences, Research School of Biology, Australian National University, Acton, ACT, 2601, Australia.
Ulrike MathesiusDepartment of Plant Sciences, Research School of Biology, Australian National University, Acton, ACT, 2601, Australia. ulrike.mathesius@anu.edu.au.
Australian National University · AUCommonwealth Scientific and Industrial Research Organisation · AU

Funding

AW Howard Memorial Trust Tim Healey Memorial ScholarshipCommonwealth Department of Education and Training Australian Government Research Training Program (AGRTP) Stipend Scholarship
6 · The paper itself

Abstract

backgroundThe formation of infection threads in the symbiotic infection of rhizobacteria in legumes is a unique, fascinating, and poorly understood process. Infection threads are tubes of cell wall material that transport rhizobacteria from root hair cells to developing nodules in host roots. They form in a type of reverse tip-growth from an inversion of the root hair cell wall, but the mechanism driving this growth is unknown, and the composition of the thread wall remains unclear. High resolution, 3-dimensional imaging of infection threads, and cell wall component specific labelling, would greatly aid in our understanding of the nature and development of these structures. To date, such imaging has not been done, with infection threads typically imaged by GFP-tagged rhizobia within them, or histochemically in thin sections.

resultsWe have developed new methods of imaging infection threads using novel and traditional cell wall fluorescent labels, and laser confocal scanning microscopy. We applied a new Periodic Acid Schiff (PAS) stain using rhodamine-123 to the labelling of whole cleared infected roots of Medicago truncatula; which allowed for imaging of infection threads in greater 3D detail than had previously been achieved. By the combination of the above method and a calcofluor-white counter-stain, we also succeeded in labelling infection threads and plant cell walls separately, and have potentially discovered a way in which the infection thread matrix can be visualized.

conclusionsOur methods have made the imaging and study of infection threads more effective and informative, and present exciting new opportunities for future research in the area.

Indexed as

Cell wallCicer arietinumInfection threadLegumesLotus japonicasMedicago truncatulaNodulationRhizobiaRoot hairTrifolium repens

Identifiers

PMID33678177
PMCPMC7938587
OpenAlexW3135597942

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.