Evidence map›Paper›PMID 33675751›Full record

ArticleThe Journal of biological chemistry

A comparative biochemical investigation of the impeding effect of C1-oxidizing LPMOs on cellobiohydrolases.

Malene Billeskov Keller, Silke Flindt Badino, Nanna Røjel, Trine Holst Sørensen, Jeppe Kari, Brett McBrayer, Kim Borch, Benedikt M Blossom, Peter Westh

Open access · goldAbstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Malene Billeskov KellerDepartment of Geosciences and Natural Resource Management, University of Copenhagen, Frederiksberg, Denmark.
Silke Flindt BadinoDepartment of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark.
Nanna RøjelDepartment of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark.
Trine Holst SørensenNovozymes A/S, Lyngby, Denmark.
Jeppe KariDepartment of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark.
Brett McBrayerNovozymes, Inc, Davis, California, USA.
Kim BorchNovozymes A/S, Lyngby, Denmark.
Benedikt M BlossomDepartment of Geosciences and Natural Resource Management, University of Copenhagen, Frederiksberg, Denmark. Electronic address: kbm@ign.ku.dk.
Peter WesthDepartment of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark. Electronic address: petwe@dtu.dk.
Technical University of Denmark · DKNovozymes (Denmark) · DKUniversity of Copenhagen · DKNovozymes (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lytic polysaccharide monooxygenases (LPMOs) are known to act synergistically with glycoside hydrolases in industrial cellulolytic cocktails. However, a few studies have reported severe impeding effects of C1-oxidizing LPMOs on the activity of reducing-end cellobiohydrolases. The mechanism for this effect remains unknown, but it may have important implications as reducing-end cellobiohydrolases make up a significant part of such cocktails. To elucidate whether the impeding effect is general for different reducing-end cellobiohydrolases and study the underlying mechanism, we conducted a comparative biochemical investigation of the cooperation between a C1-oxidizing LPMO from Thielavia terrestris and three reducing-end cellobiohydrolases; Trichoderma reesei (TrCel7A), T. terrestris (TtCel7A), and Myceliophthora heterothallica (MhCel7A). The enzymes were heterologously expressed in the same organism and thoroughly characterized biochemically. The data showed distinct differences in synergistic effects between the LPMO and the cellobiohydrolases; TrCel7A was severely impeded, TtCel7A was moderately impeded, while MhCel7A was slightly boosted by the LPMO. We investigated effects of C1-oxidations on cellulose chains on the activity of the cellobiohydrolases and found reduced activity against oxidized cellulose in steady-state and pre-steady-state experiments. The oxidations led to reduced maximal velocity of the cellobiohydrolases and reduced rates of substrate complexation. The extent of these effects differed for the cellobiohydrolases and scaled with the extent of the impeding effect observed in the synergy experiments. Based on these results, we suggest that C1-oxidized chain ends are poor attack sites for reducing-end cellobiohydrolases. The severity of the impeding effects varied considerably among the cellobiohydrolases, which may be relevant to consider for optimization of industrial cocktails.

Indexed as

CelluloseCellulose 1,4-beta-CellobiosidaseFungal ProteinsHydrolysisHypocrealesMixed Function OxygenasesOxidation-ReductionPolysaccharidesSordarialesCelluloseCellulose 1,4-beta-CellobiosidaseFungal ProteinsMixed Function OxygenasesPolysaccharidescellobiohydrolasecellulasecellulase cocktailscelluloseenzyme kineticsglycoside hydrolase family 7lytic polysaccharide monooxygenase (LPMO)pre-steady-state kineticssynergism

Identifiers

PMID33675751
PMCPMC8047454
OpenAlexW3134717826

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.